PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Itr_sc000553.1_g00016.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bZIP | ||||||||
Protein Properties | Length: 463aa MW: 49697.6 Da PI: 9.9786 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.2 | 2.3e-15 | 385 | 436 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ e+ ++ Itr_sc000553.1_g00016.1 385 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELRKKQAEMMEMQ 436 79****************************************9988877764 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.0E-14 | 381 | 446 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.461 | 383 | 434 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.1E-15 | 385 | 434 | No hit | No description |
Pfam | PF00170 | 2.6E-13 | 385 | 437 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.5E-11 | 385 | 434 | No hit | No description |
CDD | cd14707 | 9.85E-27 | 385 | 439 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 388 | 403 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 463 aa Download sequence Send to blast |
MGSNLNFKNF GNEQLGDGGG RQASFGLVRQ PSVYSLTFDE FQSAVGGGIG KDFGSMNMDE 60 LLKNIWSAEE NQSMGSASGG GQQQSSGPSG YLQRQGSLTL PRTLSQKTVD EVWRDIMKEY 120 CVEKDGSGGG SGGGGGGGVG GSNMPQRQQT LGEMTLEEFL SKAGVVREET QMAGQVTNGG 180 GVFGDLVSNT GLGFGYQQAG QNNAGLMGGR MPENNHNLML NMSQARPSQP HPGTSQLQQH 240 QHQQKVEQQK IESQQQQKVE QQNHHHHHQQ PLFPKQPALA YGAPMPIPPN GQLRSNGMKG 300 GVMGIPDAAA INGNLVQGSA LQGGGMGLVG LGPGGVTVAT GSPAVSSDGL TKSNGDTSSV 360 SPVPYAFNGN VRGRKSSALE KVVERRQRRM IKNRESAARS RARKQAYTME LEAEVAKLKE 420 ENQELRKKQA EMMEMQKNQV LEMMNVQRGA KRRCLRRTQT SPW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019156445.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X2 | ||||
Swissprot | Q9M7Q4 | 1e-113 | AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | V9XND3 | 1e-174 | V9XND3_TOBAC; ABRE binding factor | ||||
STRING | XP_009795221.1 | 1e-174 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA776 | 24 | 97 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G45249.1 | 2e-91 | abscisic acid responsive elements-binding factor 2 |
Publications ? help Back to Top | |||
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