PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | HL.SW.v1.0.G018248.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Humulus
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Family | bZIP | ||||||||
Protein Properties | Length: 257aa MW: 28303.6 Da PI: 6.0781 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.4 | 3.6e-09 | 91 | 136 | 6 | 51 |
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 + ++ NReA r++R++Kka + Lee+vk+L N++L k+l++ HL.SW.v1.0.G018248.1 91 KSKKSSGNREAVRKYREKKKAHAAYLEEEVKKLRMVNQKLVKKLQR 136 5688888************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-11 | 83 | 154 | No hit | No description |
SMART | SM00338 | 1.2E-5 | 84 | 153 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.93E-7 | 90 | 136 | No hit | No description |
Pfam | PF07716 | 3.7E-10 | 91 | 140 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14686 | 3.11E-10 | 98 | 144 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MKAKVDDGEL ETSDDPLLPN ENSSTNFHDS MSVDSFIDDL LKNARTCTHT HTCNPPGPDS 60 AHTHTCYHTH TQVLASEDDD HTTNKEHSGS KSKKSSGNRE AVRKYREKKK AHAAYLEEEV 120 KKLRMVNQKL VKKLQRQTVL EAEVLRLRSL LIDLRGKIDD ELGSFPFKKL CNTTTIFKEG 180 DCELQPAGGV LGLQCETDSP CFHSHVGSSS QVTAGVNGQM VAPWKENCQP VIADCQANIN 240 EISSADLQAM DATQPE* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 120 | 132 | KKLRMVNQKLVKK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010104020.2 | 1e-129 | basic leucine zipper 23, partial | ||||
TrEMBL | A0A2P5AN53 | 1e-150 | A0A2P5AN53_TREOI; Basic-leucine zipper transcription factor | ||||
STRING | XP_010104020.1 | 1e-114 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2567 | 32 | 77 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16770.1 | 4e-54 | bZIP family protein |