PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.17G188500.1.p
Common NameGLYMA_17G188500, LOC100776831
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 320aa    MW: 34630.3 Da    PI: 5.2064
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.17G188500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1414.3e-13143195456
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                          +kr rrk +NRe+ArrsR+RK+a ++ Le  v+ L  eN  L k+l   +++ 
  Glyma.17G188500.1.p 143 VKRLRRKVSNRESARRSRRRKQAHLADLEWQVERLRLENANLFKQLTDASQQF 195
                          79****************************************97776666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.5E-12140204IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.001142205IPR004827Basic-leucine zipper domain
PfamPF001701.5E-10143191IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.3E-8144180No hitNo description
SuperFamilySSF579591.22E-10144194No hitNo description
CDDcd147023.31E-8145196No hitNo description
PROSITE patternPS000360147162IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.102.3E-4181214No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MESKWGAAAT SIIAANFDDF KWIASMFYPD VANDNVKPCK LDPFTDEAFQ NLEAVTASST  60
CGGVTEDTLV HSQNLTPIQS TISATIDSLS SICVGSPLSA NKPNARDNQV KGATTTTSGS  120
SREPSDEDDE AGPCEQSTNA IDVKRLRRKV SNRESARRSR RRKQAHLADL EWQVERLRLE  180
NANLFKQLTD ASQQFREADT NNRVLKSDVE ALRAKVKLAE DMITRGTLTP TNNQILQNQS  240
PLNTPPQLNT NNLRRMGYVS PTFTVHGNDA TASYGGGITV SGQNSPLGGL GNLDNIPCSD  300
FNSGVNSDNA VSSMTSMWP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146162RRKVSNRESARRSRRRK
2156163RRSRRRKQ
3158163SRRRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.243550.0cotyledon| flower| seed coat
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.17G188500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006601038.10.0basic leucine zipper 9
RefseqXP_028208214.10.0basic leucine zipper 9-like
TrEMBLA0A0B2QHM40.0A0A0B2QHM4_GLYSO; Regulatory protein opaque-2
TrEMBLK7MMI20.0K7MMI2_SOYBN; Uncharacterized protein
STRINGGLYMA17G24602.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Representative plantOGRP69561017
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.13e-47basic leucine zipper 9