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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.12G081700.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
C2H2 |
| Protein Properties |
Length: 397aa MW: 44061.7 Da PI: 7.6893 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.12G081700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 23.1 | 1.8e-07 | 229 | 251 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y C+ Cgk F+r nL+ H+r H
Glyma.12G081700.1.p 229 YFCQVCGKGFKRDANLRMHMRAH 251
78*******************99 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 397 aa
Download sequence Send
to blast |
MMPINEATIS SSTNDFQELH MFPVAMNEYL VSPSLEASSS SASHSSNSLL FHLLLLKDKL 60
GQLQNLVDVL VSPQQNLPES TPTAISTINN AIQEIIMAAT SMRFTCQQMI PSSSSGTNTT 120
NELQQKQIDH GRLLPPHHES NFVHNNRGVA SNNINIVSDI NRGQSFLLSS SIEGEALDWF 180
AESYNNNRNS GNYCNPKDDE AANIISNIMG EMSDIIELDA ADLLAKYSYF CQVCGKGFKR 240
DANLRMHMRA HGEEYKTSSA LCNPMKNNKE NSNLLLLGAE EGSGATKRYS CPQQGCRWNQ 300
RHAKFQPLKS MICAKNHYKR SHCPKMYVCN RCNQKHFSVI SDLRTHEKHC GDPKWLCSCG 360
TTFSRKDKLM GHVALFVGHT PVTSGLSSYS GKSEQL*
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed at low levels in roots (e.g. root tips and lateral roots), leaves (e.g. at the edge of mature leaves, possibly in hydathodes, and in vascular bundles), flowers (e.g. floral filaments), stems, siliques and cotyledons. {ECO:0000269|PubMed:23935008}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. Together with STOP1, plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation. {ECO:0000269|PubMed:23935008}. |
