PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.11G213700.1.p
Common NameGLYMA_11G213700, LOC100813413
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 506aa    MW: 54555 Da    PI: 8.1727
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.11G213700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.65.2e-32317370255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Glyma.11G213700.1.p 317 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 370
                          9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.23E-15314370IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.2E-28315370IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-23317370IPR006447Myb domain, plants
PfamPF002499.7E-7318369IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010158Biological Processabaxial cell fate specification
GO:0010229Biological Processinflorescence development
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    Send to blast
MPLEGIFIEP TSTSIPDLSL HISPPSTSSF SSLICSNNNN NNNTSGGGGG INYEAHNSRS  60
TNFPSQAHTE LSLGRNFSVG GGGRGGGALE EPPPHNNNIN NNPYYQTQKA HLQHLHQHHS  120
NASRATTSTT TSSSNHMSHI NYGVSLLDVS SEGMRPIKGI PVYHNRSFPF LPLEHSRSDK  180
DHHAKMCLYH HMPTYPSLSS SCSPLCPSSS SSSPAAPYFV ATAATAGGLD PMSYLSCSGG  240
TTNPAAHRAA TATRFNGFSG EAFKSHHPLH HHHHSSSSSS SPQYGVGPGP SHHEVSSGLM  300
RSRFLPKLPA KRSMRAPRMR WTSTLHARFV HAVELLGGHE RATPKSVLEL MDVKDLTLAH  360
VKSHLQMYRT VKTTDKPAAS SGLSDGSGED DMSPMGSSGG MRQFSDQRSL SDRPVQQDMD  420
YSSANNTLWS NSSSSREPWQ QNNSNDIDGF RPPIFQSQQI SGGHQIQECD STQLKNSLSG  480
SNLECKNPSL EFTLGRPDWN GKGQA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-16318372357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-16318372357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-16318372357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-16318372357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.170210.0flower| hypocotyl| leaf| vegetative bud
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.11G213700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006591320.10.0transcription repressor KAN1 isoform X2
TrEMBLK7LRG70.0K7LRG7_SOYBN; Uncharacterized protein
STRINGGLYMA11G33356.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17563391
Representative plantOGRP5701580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.14e-61G2-like family protein