PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.11G045900.1.p
Common NameGLYMA_11G045900, LOC102661188
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 171aa    MW: 19848.7 Da    PI: 11.2428
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.11G045900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.45.5e-1271130564
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                          ++ rr+++NRe+ArrsR RK+  +e+L++ +  +  eN++L + l+ l  ++ +l++e+e
  Glyma.11G045900.1.p  71 RKRRRMISNRESARRSRIRKQRHLENLRNQMNLFRVENRKLNNGLQFLLHHCNRLRTENE 130
                          6789***************************************************99985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.6E-962126No hitNo description
SMARTSM003389.5E-1267131IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.369132IPR004827Basic-leucine zipper domain
PfamPF001705.9E-1071130IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.31E-1071123No hitNo description
CDDcd147025.83E-1672123No hitNo description
PROSITE patternPS0003607489IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MLSALPFQGN PFPALDYAFM PWDGLDSLGF KPTSPNPVTS SSGSGYPNRT HAEEKPASDK  60
SNHVTSVMEE RKRRRMISNR ESARRSRIRK QRHLENLRNQ MNLFRVENRK LNNGLQFLLH  120
HCNRLRTENE WLLSERPMLR QKLANINQIL LFRHLQPFSS AWPCNIVLAE *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17074RKRRR
28390RRSRIRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.11G045900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006590620.11e-123bZIP transcription factor 53
RefseqXP_028189273.11e-123bZIP transcription factor 53-like
TrEMBLA0A0B2PUK91e-122A0A0B2PUK9_GLYSO; BZIP transcription factor 2
TrEMBLK7LN231e-122K7LN23_SOYBN; Uncharacterized protein
STRINGGLYMA11G04920.21e-123(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Representative plantOGRP8744815
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.13e-30basic leucine-zipper 5