PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.10G276100.1.p
Common NameGLYMA_10G276100, LOC100775783
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 457aa    MW: 50993.9 Da    PI: 6.5117
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.10G276100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.76.7e-10167207340
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLea 40 
                          + k  rr+++NReAAr+sR+RKka++++Le+   + ++Le+
  Glyma.10G276100.1.p 167 DQKTVRRLAQNREAARKSRLRKKAYVQQLETsrvRLAQLEQ 207
                          568889***********************973224444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.8E-6165228IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.266167211IPR004827Basic-leucine zipper domain
PfamPF001705.1E-7168208IPR004827Basic-leucine zipper domain
CDDcd147081.56E-20169221No hitNo description
Gene3DG3DSA:1.20.5.1707.8E-8169213No hitNo description
SuperFamilySSF579591.29E-6169212No hitNo description
PROSITE patternPS000360172187IPR004827Basic-leucine zipper domain
PfamPF141449.1E-30254328IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    Send to blast
MQSFNTTESE STSPLYSHSP FYHRGNDPSR NPTRFSDLQH SFRQHDAVDL SSSSVFGAKS  60
SNVAVVASNL QCGTFNTNLG CAEFGSIEQR GMFQRGTNSA TTVSMGNRHV ENWAEDSQHT  120
EDTCTDIDTD DKNQCFSTVS WCNGVGDGAL VVVDSQDQSK TKVKAEDQKT VRRLAQNREA  180
ARKSRLRKKA YVQQLETSRV RLAQLEQELQ RARQQGAFIA TGNQGDRSHS AVGNGALAFD  240
MDYARWFDEH QRLINDIRSA INSQMDENEL HLLVDGVMAH YDELFRLKSI GAKADVFHIL  300
SGMWKTPAER CFIWLGGFRS SELLKIVRNQ LEPLTEQQLM GIYNLQQSSQ QAEDALSQGM  360
DALQQSLSET LSSSSLGPSG SGNVAEYMGQ MAIALGKLAT LENFLHQADL LRQQTLQQMR  420
RILTTFQAAR ALLVINDYVS RLRALNSLWL ACPREY*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.189810.0somatic embryo
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.10G276100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2354731e-119AC235473.1 Glycine max strain Williams 82 clone GM_WBc0110I22, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003536694.10.0transcription factor TGA2.2
RefseqXP_028182652.10.0transcription factor TGA2.2-like
SwissprotQ415581e-163HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0B2PD410.0A0A0B2PD41_GLYSO; Transcription factor HBP-1b(C1)
TrEMBLI1LEY40.0I1LEY4_SOYBN; Uncharacterized protein
STRINGGLYMA10G42280.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60223149
Representative plantOGRP7221667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-130bZIP family protein