PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.02G176800.5.p
Common NameGLYMA_02G176800, LOC100776311
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 383aa    MW: 42911.1 Da    PI: 9.2209
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.02G176800.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.97e-1189118534
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeek 34 
                          k  rr+++NReAAr+sR+RKka++++Le  
  Glyma.02G176800.5.p  89 KTLRRLAQNREAARKSRLRKKAYVQQLESS 118
                          7789***********************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.4E-880131No hitNo description
SMARTSM003387.2E-485138IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.16387131IPR004827Basic-leucine zipper domain
CDDcd147084.62E-2289141No hitNo description
SuperFamilySSF579595.69E-789131No hitNo description
PfamPF001705.5E-889121IPR004827Basic-leucine zipper domain
PROSITE patternPS00036092107IPR004827Basic-leucine zipper domain
PfamPF141442.3E-30182254IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MRPPPTLNIF PSQPMHAVPP SNSKVNMGLP STQTSTGSKR QPETSMAKPK PHTEAAAAPE  60
PPKAVKREGN LKGTTSSSEQ EAPKTPDPKT LRRLAQNREA ARKSRLRKKA YVQQLESSRI  120
KLNQIEQELQ RARAQGILMG GGNALLGGEQ GFHMAMSGIS SEAAIFDVEY ARWLEEHHRI  180
VCELRAVLQE HLHENELRLY VDNCLAHYDQ VMNLKSMVAK TDVFHLVFGV WKTPAERCFM  240
WIGGFRPSEL IKIILGQIEP LTEQQILGIC GLQQSTQEAE EALSQGLDAL NQSLSETITS  300
DSLWCPPNMT NYMGQMAVAI NKLSTLESFV RQADNLRHQT IHRLHQLLTT RQAARCLVAI  360
SEYFHRLRAL SSLWSTRPRQ DQ*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.425770.0leaf
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Specifically expressed in roots. {ECO:0000269|PubMed:12777042}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.02G176800.5.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150412e-97AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003519053.10.0bZIP transcription factor TGA10 isoform X1
RefseqXP_006575223.10.0bZIP transcription factor TGA10 isoform X4
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0B2NPL20.0A0A0B2NPL2_GLYSO; Transcription factor HBP-1b(C1)
TrEMBLA0A0R0KYA10.0A0A0R0KYA1_SOYBN; Uncharacterized protein
TrEMBLK7K9610.0K7K961_SOYBN; Uncharacterized protein
STRINGGLYMA02G30220.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-167bZIP family protein