PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.02G097900.1.p
Common NameGLYMA_02G097900, LOC100797393
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 468aa    MW: 51853.5 Da    PI: 7.7584
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.02G097900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.21.1e-10183217539
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 
                          k  rr+++NReAAr+sR+RKka++++Le    +L 
  Glyma.02G097900.1.p 183 KTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLV 217
                          788*************************7555554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-7174225No hitNo description
SMARTSM003384.1E-8179248IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.082181225IPR004827Basic-leucine zipper domain
PfamPF001702.0E-7183219IPR004827Basic-leucine zipper domain
CDDcd147086.18E-23183235No hitNo description
SuperFamilySSF579597.5E-7183226No hitNo description
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
PfamPF141444.5E-28266340IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MKNMQGFKTA QQPSSQQQLY CHSSFLLRGN DPNRNTTRFS DLGELHHSSS VFHHEDAADL  60
SSSSMFSVKS NNVVGGSNIQ YGTLNTLSTN VGSAEIGTSV RGCMDTGQQL MYHKGVTTAA  120
LPLGNGQVEN WDDSGLADNS QQTDHTSTDI DTDDIIQCNR VKNGTRMVVH SKDATKVKPG  180
DQKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRVKLVHLE QELQRARQQG IFIATPGDQG  240
HLAVGNGALA FDIDYAHWVD EHQRLLNDLR TAINSQMSDS DLHILVDSVM AHYNELFRLK  300
SIGAKADVLH IHNGMWKTPV ERCFMWLGGL RSSELLKIIK NHLEPLTDQQ LMGICNLQQS  360
SQQAEDALNQ GMEALQQSLV EILSSTSLGP NGSGNVADYM GQMALAMGKL AVLGSFLHKA  420
DLLKQETLEQ LQRILTTRQT ARALLVQNDY ISRLRALSSL WLARPRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.02G097900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006574877.10.0transcription factor TGA2.2 isoform X1
RefseqXP_028201497.10.0transcription factor TGA2.2-like isoform X1
SwissprotQ415581e-161HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0B2R0A30.0A0A0B2R0A3_GLYSO; Transcription factor HBP-1b(C1)
TrEMBLK7K7E40.0K7K7E4_SOYBN; Uncharacterized protein
STRINGGLYMA02G10833.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60223149
Representative plantOGRP7221667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-146bZIP family protein