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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Gh_A11G2912 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
E2F/DP |
| Protein Properties |
Length: 329aa MW: 36998.6 Da PI: 6.8615 |
| Description |
E2F/DP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_A11G2912 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | E2F_TDP | 72.6 | 4.4e-23 | 61 | 140 | 4 | 71 |
E2F_TDP 4 ksLrlltqkflklleksee.givtlnevakeLvse...............dvknkrRRiYDilNVLealnliekkekneirwkg 71
+Lr+++ + +++k e+ g +t+ eva+e+++e ++kn rRR+YD+lNVL+a+++i++ ek+eirwkg
Gh_A11G2912 61 GGLRQFSVM---VCKKLESkGSTTYAEVADEIIEEfaatqsntagsldefHEKNVRRRVYDALNVLMAMDIITR-EKKEIRWKG 140
589999999...****9999******************************999*********************.*******98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007049 | Biological Process | cell cycle |
| GO:0005667 | Cellular Component | transcription factor complex |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MDDLHLEDST YSEQSPVATP TNASTSESAY RMNRSAVKQK NGDADLVEGT TKKKVSRMPG 60
GGLRQFSVMV CKKLESKGST TYAEVADEII EEFAATQSNT AGSLDEFHEK NVRRRVYDAL 120
NVLMAMDIIT REKKEIRWKG LSTTQTKDLE ELKAAHVQLM TSISRKTAYL KDLEEQIAGL 180
RNIIKRNQRM LNSSNNSNNT APKEGFTLPF ILVQTSPHAT VEIEISEDMQ LVHLDFNRQS 240
RIFLIVSSFI RSTPFSLHDD AYILKLMHCY QQPEGINLSQ SSSIHSSSSS CKASGGVSKP 300
FYWNSETDTV KKVPYLQISD HQYEEQSGH
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed in a cell cycle-dependent manner. Low expression at the G1/S transition and increases during the S phase. S/G2 transitions. {ECO:0000269|PubMed:11669580}. |
| Uniprot | TISSUE SPECIFICITY: Strongly expressed in the actively dividing tissues of the shoot apical meristem, young leaf primordia, the vascular tissues of the maturing leaf primordia and axillary buds. {ECO:0000269|PubMed:11889041}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Involved in the regulation of the G1/S transition. Increases the DNA binding and the transactivation activities of E2F proteins after heterodimerization. The complex DPA/E2FA promotes cell division and acts as a regulator of the endocycle. Positively regulates the activity of S phase-specific genes. {ECO:0000269|PubMed:11889041, ECO:0000269|PubMed:11891240}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by the transcription factor ERF114. {ECO:0000269|PubMed:23616605}. |
