PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr5P24570_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

bZIP

Protein Properties

Length: 388aa MW: 40949.2 Da PI: 9.5157

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr5P24570_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.3	9.5e-15	310	359	5	53
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke.leelk 53 +r++r++kNRe+A rsR+RK+a++ eLe +v++L+++N++L+k+ +e+l+ GSMUA_Achr5P24570_001 310 RRQKRMIKNRESAARSRARKQAYTMELEAEVAKLKEQNQELQKKqAEMLE 359 69*************************************99865134443 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.3E-14	304	371	No hit	No description
SMART	SM00338	1.2E-12	306	371	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.967	308	357	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	8.13E-11	310	359	No hit	No description
Pfam	PF00170	1.5E-12	310	359	IPR004827	Basic-leucine zipper domain
CDD	cd14707	6.66E-28	310	364	No hit	No description
PROSITE pattern	PS00036	0	313	328	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence Send to blast
MGGGADGETP LARQGSIYSL TFDEFQSTLG GLGKDLGSMN VDELLKNIWN AEESYAIAAT 60 LGEGGGGAGG APGLQRQGSL TLPRTLSHKT VDEVWRGFVD ASSSGQGPVV GGSSYVMRQP 120 TLGEMTLEEF LVRAGVAREE LTPPPVHPRP ADTKINTTSV FFGDLPTVSS STGLSVGFNR 180 ANQSNGNVAN APVPHSSAAN FGMTVTAARS YAAPMPLETG VDMGNPQGMR GGGLVSFGDA 240 GMDNQLMKGM VGLGTAGVVT AKGSPATHLS PDVLGKANGD LSSVSPAPYT VNSGMRGRKH 300 SGAVEKVIER RQKRMIKNRE SAARSRARKQ AYTMELEAEV AKLKEQNQEL QKKQAEMLEM 360 EKNQALQMIS QQNGPKKQCL RRTQTGPW

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence Send to blast

MGGGADGETP LARQGSIYSL TFDEFQSTLG GLGKDLGSMN VDELLKNIWN AEESYAIAAT  60
LGEGGGGAGG APGLQRQGSL TLPRTLSHKT VDEVWRGFVD ASSSGQGPVV GGSSYVMRQP  120
TLGEMTLEEF LVRAGVAREE LTPPPVHPRP ADTKINTTSV FFGDLPTVSS STGLSVGFNR  180
ANQSNGNVAN APVPHSSAAN FGMTVTAARS YAAPMPLETG VDMGNPQGMR GGGLVSFGDA  240
GMDNQLMKGM VGLGTAGVVT AKGSPATHLS PDVLGKANGD LSSVSPAPYT VNSGMRGRKH  300
SGAVEKVIER RQKRMIKNRE SAARSRARKQ AYTMELEAEV AKLKEQNQEL QKKQAEMLEM  360
EKNQALQMIS QQNGPKKQCL RRTQTGPW

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	JN003476	3e-31	JN003476.1 Elaeis guineensis putative abscissic acid (ABI5) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009402117.1	0.0	PREDICTED: bZIP transcription factor TRAB1-like
Refseq	XP_009402119.1	0.0	PREDICTED: bZIP transcription factor TRAB1-like
Refseq	XP_009402120.1	0.0	PREDICTED: bZIP transcription factor TRAB1-like
Refseq	XP_009402122.1	0.0	PREDICTED: bZIP transcription factor TRAB1-like
Swissprot	Q9M7Q4	1e-103	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	M0T1D2	0.0	M0T1D2_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr5P24570_001	0.0	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP706	38	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	4e-91	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]