PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr3P07000_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

bZIP

Protein Properties

Length: 403aa MW: 42601 Da PI: 9.4487

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr3P07000_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.4	7.5e-14	325	377	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR RK+a++ +Le +v++L++ N++L k+ el ++ + GSMUA_Achr3P07000_001 325 RRQRRMIKNRESAARSRDRKQAYTMKLEAEVAKLQELNQELNKKQAELMEMQK 377 79******************************************999999865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.2E-12	321	385	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.852	323	374	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.24E-10	325	375	No hit	No description
CDD	cd14707	2.19E-24	325	379	No hit	No description
Pfam	PF00170	2.4E-12	325	377	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.8E-14	325	375	No hit	No description
PROSITE pattern	PS00036	0	328	343	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence Send to blast
MMGRGRGGKG GGGSGTDGNG GGLARQPSIY SLTFDELQST LVTGNDFGSM NMDELLKNIW 60 STEESQAMAA AAPAPVLDGS FAGLQRQGSL TLPRTLSQKT VDQVWRDLIC PAQQGMPPAA 120 GVSHQHHQPT LGEMTLEEFL VRAGAVRDEL APPQTCASNS GNNSSSKNNN NAISNVLFHD 180 LRVANNVPQL ALGFPQAGRS DRDVVASNPF TDTSATNLAV MVATGPSPYV APMAPGDGFV 240 GMGNPRAGGL VGIGDVGINN RLMPGAVGLG AAGGAGAVGT SVSHLPSDAP RKHGADLSSV 300 SPVPYVVNGG LRGKKSSAVD NFLERRQRRM IKNRESAARS RDRKQAYTMK LEAEVAKLQE 360 LNQELNKKQA ELMEMQKDQM SEMINQQQGP KKLCLRRTQT VSW

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence Send to blast

MMGRGRGGKG GGGSGTDGNG GGLARQPSIY SLTFDELQST LVTGNDFGSM NMDELLKNIW  60
STEESQAMAA AAPAPVLDGS FAGLQRQGSL TLPRTLSQKT VDQVWRDLIC PAQQGMPPAA  120
GVSHQHHQPT LGEMTLEEFL VRAGAVRDEL APPQTCASNS GNNSSSKNNN NAISNVLFHD  180
LRVANNVPQL ALGFPQAGRS DRDVVASNPF TDTSATNLAV MVATGPSPYV APMAPGDGFV  240
GMGNPRAGGL VGIGDVGINN RLMPGAVGLG AAGGAGAVGT SVSHLPSDAP RKHGADLSSV  300
SPVPYVVNGG LRGKKSSAVD NFLERRQRRM IKNRESAARS RDRKQAYTMK LEAEVAKLQE  360
LNQELNKKQA ELMEMQKDQM SEMINQQQGP KKLCLRRTQT VSW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	6	12	GGKGGGG

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009391358.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1
Swissprot	Q9M7Q4	8e-94	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	M0SCG7	0.0	M0SCG7_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr3P07000_001	0.0	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP706	38	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	3e-44	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]