PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr10P19460_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family ERF
Protein Properties Length: 215aa    MW: 22999.8 Da    PI: 8.7645
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr10P19460_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.7e-184190255
                     AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                             ykGVr+++ +g+Wv+eIr p     +  +r++lg++ t+e Aa+a++aa ++l+g
  GSMUA_Achr10P19460_001 41 PYKGVRRRS-WGSWVSEIRAP-----HqkTRIWLGSYSTPEAAARAYDAALLCLKG 90
                            59****887.**********7.....335************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.7E-294199IPR001471AP2/ERF domain
PROSITE profilePS5103221.7864198IPR001471AP2/ERF domain
SMARTSM003801.4E-3341104IPR001471AP2/ERF domain
PRINTSPR003678.3E-94253IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-1942100IPR016177DNA-binding domain
CDDcd000186.85E-2042100No hitNo description
PfamPF008472.3E-114290IPR001471AP2/ERF domain
PRINTSPR003678.3E-96480IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MGKSSRVLRP PNSSIDPLLR CSSPSSSSSP CQSMGSGGKR PYKGVRRRSW GSWVSEIRAP  60
HQKTRIWLGS YSTPEAAARA YDAALLCLKG SSASFNFPAS LPSHLPASAM SPKSIQRVAA  120
AAAAVVVTSP TASTTTSRSP SPPPPPSPSL DATNEDHQST MTSSATSTRS GEIDEPWIDL  180
GAFQSPRCMD HMINPLISSW QECEEMGDIN LWSFF
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response (PubMed:27137403). Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:27137403}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA) and ethylene. Down-regulated by freezing and heat stresses. {ECO:0000269|PubMed:21069430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY7392710.0AY739271.1 Musa acuminata putative AP2 domain-containing transcription factor gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009380259.11e-154PREDICTED: ethylene-responsive transcription factor ERF014-like
SwissprotQ9SFE41e-34ERF12_ARATH; Ethylene-responsive transcription factor ERF012
TrEMBLM0RJM11e-153M0RJM1_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P19460_0011e-153(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31973469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.12e-25ERF family protein
Publications ? help Back to Top
  1. Kazama D,Kurusu T,Mitsuda N,Ohme-Takagi M,Tada Y
    Involvement of elevated proline accumulation in enhanced osmotic stress tolerance in Arabidopsis conferred by chimeric repressor gene silencing technology.
    Plant Signal Behav, 2014. 9(3): p. e28211
    [PMID:24614501]
  2. Kazama D, et al.
    Identification of Chimeric Repressors that Confer Salt and Osmotic Stress Tolerance in Arabidopsis.
    Plants (Basel), 2013. 2(4): p. 769-85
    [PMID:27137403]