PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_rscf00001500.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | bZIP | ||||||||
Protein Properties | Length: 505aa MW: 56807.8 Da PI: 6.61 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.5 | 1.9e-10 | 235 | 272 | 7 | 44 |
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 rr+++NReAAr+sR+RKka++++Le +L++ ++ FANhyb_rscf00001500.1.g00001.1 235 LRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQE 272 69************************876666655554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.0E-6 | 228 | 301 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.737 | 231 | 275 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 4.72E-23 | 233 | 285 | No hit | No description |
Pfam | PF00170 | 1.5E-7 | 234 | 273 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.38E-7 | 235 | 276 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 7.4E-8 | 236 | 276 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 236 | 251 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.0E-32 | 323 | 397 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 505 aa Download sequence Send to blast |
MGFSRAFEET EERAGEQYRL ETKLASFMAF SLQGNQLDPQ QQQQQQEHHH QSHHQIQNHH 60 HHQQQQQQHH HEIQYATMQP SSSNIPSVNF IGSSKDSGAY DLGELDQALF LYLDGQQQDH 120 HHHQAPHHVQ DQRHQTSSGM RPPTLNIFPS QPMHVEPSST KGVSTAGIVS SATSGSKRPS 180 EPSMELANPR KIDAAAPSGP PEPAKTIKRE GNCKGPTTSS SEQEGPKTPD PKQTLRRLAQ 240 NREAARKSRL RKKAYVQQLE SSRIKLTQLE QELQRARTQG TFFGGGLVGA EQGVPVGINN 300 ISSDAAVFDI EYARWLEEHH RLMCELRAAV QEHLPENELR LFVDNCLAHY DEVMNLKSMV 360 AKTDVFHIVS GMWKTPAERC FMWMGGFRPS EVIKILLTQI EPLTEQLMAI YSLQQSTSEA 420 EDALTQGLEA LNQSLSDTIA SDSLSMPPNM ANYMGQMALA MNKLSTLEGF VRQVRILSLT 480 VCSFYLQSQI MLLDYARDEL RMTVT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00491 | DAP | Transfer from AT5G06839 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004309443.1 | 0.0 | PREDICTED: transcription factor HBP-1b(c38) | ||||
Swissprot | Q52MZ2 | 0.0 | TGA10_TOBAC; bZIP transcription factor TGA10 | ||||
TrEMBL | A0A2P6RDP2 | 0.0 | A0A2P6RDP2_ROSCH; Putative transcription factor bZIP family | ||||
STRING | XP_004309443.1 | 0.0 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4731 | 34 | 55 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-159 | bZIP family protein |