PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_rscf00000909.1.g00007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | EIL | ||||||||
Protein Properties | Length: 602aa MW: 67768.4 Da PI: 4.9562 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 499.4 | 1.9e-152 | 45 | 416 | 1 | 354 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipe 79 +el++rmw+d++llkrl+e+++ kea ++++++++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipe FANhyb_rscf00000909.1.g00007.1 45 DELERRMWRDRILLKRLREQTRG----KEA-ADNARQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPE 118 79******************998....666.788899****************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS- CS EIN3 80 kgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdpp 158 kgkpv+gasd+Lr+WWkekv+fdrngpaaiskyqa+n+i++ +++ ++ s++h+l+elqDTtlgSLLsalmqhcdpp FANhyb_rscf00000909.1.g00007.1 119 KGKPVSGASDNLREWWKEKVRFDRNGPAAISKYQAENAIPGMMEDC-ISVASTPHTLQELQDTTLGSLLSALMQHCDPP 196 *******************************************999.669***************************** PP TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT CS EIN3 159 qrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdk 237 qrrfplekgv+pPWWPtG+e+ww++l l+kdqg+ppykkphdlkkawkvsvLtavikhmsp+i++ir+l+rqsk+lqdk FANhyb_rscf00000909.1.g00007.1 197 QRRFPLEKGVSPPWWPTGNEEWWPQLNLAKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDINKIRKLVRQSKCLQDK 275 ******************************************************************************* PP --SHHHHHHHHHHTTTTT-S--XXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX............ CS EIN3 238 msakesfallsvlnqeekecatvsah..ssslrkqspkvtlsceqkedvegkkeskikhvqavktta............ 302 m+akes+++l+++nqee +++++ ++ ++ + +s ++++s+ +++dveg ++ + +v+ +k FANhyb_rscf00000909.1.g00007.1 276 MTAKESATWLAIINQEEVLARRMFPDicPPLSAGGSGSFVISDTSDYDVEGVDDDQDVEVEDCKPLLdhfnmgtigqrp 354 **************************96556667****************77777656677776655899********* PP .........XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXX.XXXXXXXXXXXXX CS EIN3 303 .........gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetel.ifadknsisqney 354 + ++ +krk++++e+ +++ ++ ++tc+ q+++s++++ +f+d ++++++++ FANhyb_rscf00000909.1.g00007.1 355 qfkgelietNSDFGKKRKQQQAEEPQMMLNQKVYTCEFLQCPHSDSRFgGFSDITARNNHQM 416 *********99******9999888888878788**************9459********996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.3E-129 | 45 | 292 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 7.1E-75 | 166 | 302 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.31E-61 | 171 | 295 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 602 aa Download sequence Send to blast |
MGIFEDMGFC GNLDFFSAPA GEGEVVPEPE ATVEEDYSDE ELDVDELERR MWRDRILLKR 60 LREQTRGKEA ADNARQRQSQ EQARRKKMSR AQDGILKYML KMMEVCKAQG FVYGIIPEKG 120 KPVSGASDNL REWWKEKVRF DRNGPAAISK YQAENAIPGM MEDCISVAST PHTLQELQDT 180 TLGSLLSALM QHCDPPQRRF PLEKGVSPPW WPTGNEEWWP QLNLAKDQGP PPYKKPHDLK 240 KAWKVSVLTA VIKHMSPDIN KIRKLVRQSK CLQDKMTAKE SATWLAIINQ EEVLARRMFP 300 DICPPLSAGG SGSFVISDTS DYDVEGVDDD QDVEVEDCKP LLDHFNMGTI GQRPQFKGEL 360 IETNSDFGKK RKQQQAEEPQ MMLNQKVYTC EFLQCPHSDS RFGGFSDITA RNNHQMSCPY 420 RNNCSPVFGM PNLLNNDKPV GFPLPVAQAK PAIIQQVNPT SPFNVSGLGL ADDGQKMISE 480 LMSSYDGNTQ QTSNPGNFSA VQDPNHQQVN YQFEVGDHFY SQGMVMDRSN VPEPTPMPMH 540 QQVLPSPEVQ FDQCKVFDSS FGNNSNDAIA DLRFGTQFSL AQLGYTAGNS LLKQDASSIW 600 YI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 9e-80 | 169 | 301 | 1 | 133 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 9e-80 | 169 | 301 | 1 | 133 | Protein ETHYLENE INSENSITIVE 3 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004306440.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A482EXA5 | 0.0 | A0A482EXA5_9ROSA; Ethylene-insensitive 3-like 2 protein | ||||
STRING | XP_004306440.1 | 0.0 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |