PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00000155_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family Trihelix
Protein Properties Length: 312aa    MW: 34520.1 Da    PI: 10.045
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00000155_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix37.94.6e-1235972286
                          trihelix 22 rrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                                       ++klk+++We+v++++ +++g+++spk   qCk+k+e+++kry+ + +++ +      s++p++ +l+
  FANhyb_icon00000155_a.1.g00001.1 35 DEAKLKGHDWEDVARHVsSRGGCSKSPKtqtQCKNKIESMKKRYRSESATADG------SSWPLYPRLD 97
                                      4679*************878889987754449****************99997......4699999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.8E-153197No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MEKEGNQDQT PSLLSNNLES PRSKPLISSD RLKRDEAKLK GHDWEDVARH VSSRGGCSKS  60
PKTQTQCKNK IESMKKRYRS ESATADGSSW PLYPRLDLLL RGSGPPPPTT AAATVVAAVA  120
PPAPPQQPPL VTHHSNHALM LLEPSVPVSP PTQPALPPPP PPHLGTAQNS FGSDGVDRDA  180
KEEEAGMKLS DHASDKNPLE IDSSTPALYS DKEKLRSKRM KRKIEKKTRR RREELEIAES  240
IRWLAEVVVR SEQSRMDTMR EIERMRVEAE AKRGEMDLKR TEIIANTQLE IARIFAAGAG  300
KGVDSSLRIG RS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004307092.10.0PREDICTED: trihelix transcription factor ASIL2
TrEMBLA0A2P6SA481e-178A0A2P6SA48_ROSCH; Putative transcription factor Trihelix family
STRINGXP_004307092.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49943350
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.11e-78sequence-specific DNA binding transcription factors