PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.G03094.1.p | ||||||||
Common Name | EUGRSUZ_G03094, LOC104454425 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 254aa MW: 27418.2 Da PI: 5.2372 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.8 | 3.1e-19 | 71 | 119 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+WvAeIr+p + r r +lg+f ta eAaka+++a+ +++g Eucgr.G03094.1.p 71 YRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTAIEAAKAYDEAATAMYG 119 9****999.**********8...3.35**********************99987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 2.2E-36 | 70 | 133 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.25E-30 | 70 | 129 | No hit | No description |
PROSITE profile | PS51032 | 22.273 | 70 | 127 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 8.8E-32 | 70 | 128 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.62E-21 | 71 | 128 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 7.4E-14 | 71 | 119 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.9E-10 | 71 | 82 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.9E-10 | 93 | 109 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0010286 | Biological Process | heat acclimation | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence Send to blast |
MSPEIVERKR SRSRKEGSMS VAETLAKWKQ YNDQLDPQAN GDKPARRVPA KGSKKGCMKG 60 KGGPENTTFN YRGVRQRTWG KWVAEIREPN RGSRLWLGTF PTAIEAAKAY DEAATAMYGP 120 CARLNFPTAS HPMSFGDLDA RATTPVGTTA NTTGTPSTGY SAGTPSTGYS AGTPSEATTL 180 SSQSELTGGP EVKDGDRKGE SNADGGEMEP KSESIVDFDW LSDYAVDDLF DVDELLRTLE 240 SDPKFSSDVK MEH* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 1e-16 | 71 | 127 | 15 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 8 | 13 | KRSRSR |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00302 | DAP | Transfer from AT2G40340 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.G03094.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010067565.1 | 0.0 | PREDICTED: dehydration-responsive element-binding protein 2B | ||||
TrEMBL | A0A059BJ53 | 0.0 | A0A059BJ53_EUCGR; Uncharacterized protein | ||||
STRING | XP_010067565.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM8532 | 25 | 38 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.1 | 9e-32 | DRE-binding protein 2A |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.G03094.1.p |
Entrez Gene | 104454425 |