PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F02154.1.p
Common NameEUGRSUZ_F02154, LOC104449190
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB_related
Protein Properties Length: 604aa    MW: 63361.5 Da    PI: 5.5886
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F02154.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.21.9e-08207251144
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 
                       r++W++ Ed+ l+ av++ G g+W+ I +    g  Rt+ q+  rw
  Eucgr.F02154.1.p 207 RKPWSEAEDLELIAAVQKCGEGNWANILKadFKG-DRTASQLSQRW 251
                       789************************7621455.89998888888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500903.984976IPR017877Myb-like domain
PROSITE profilePS5129414.423202259IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.7E-13203256IPR009057Homeodomain-like
SuperFamilySSF466892.8E-12204256IPR009057Homeodomain-like
SMARTSM007174.2E-9206257IPR001005SANT/Myb domain
PfamPF002492.8E-7207251IPR001005SANT/Myb domain
CDDcd116602.48E-14208256No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 604 aa     Download sequence    Send to blast
MNESVVESKP QKRKGSISEE DISTLLQRYS ATAVLCLLQE VAQFQGVKVD WNELVKRTST  60
GITNAREYRT LWRYLAYRST LPEKLEDGDE PLDDDSDLEY ELEAFPAVST EASTEAAACV  120
KVLIGSGITS DPSLQSNSTV EAPLTINIPN GQSSRVSESS QPPCYTQGVN ITVPVSVRKQ  180
PLPAVTSNEG LDVNGLASGN NASRKKRKPW SEAEDLELIA AVQKCGEGNW ANILKADFKG  240
DRTASQLSQR WAIIRKRHGN LNVGIANSTG PQLSEAQLAA RHAVSLALDM PVKNSRTGAT  300
PNGTFGNSTQ PAAAAESPFP GNIAGLAHHQ TQQISQQRSS SVQSLSIAPK SRVPPKKASP  360
KADMSPDSMG IKAAAVAAGA RIATPSDAAS LLKAAQAKNA VHIIPSGSLI KPSSIPGGSA  420
TQSRPHPGVN FRSTGLAVTS SHAGSAAEKE STSATASIPS APAKEPAISL QKSNISPVVA  480
TELPLNQEAK NDEKMVDSVP NNVMKEPTKE DGTSALDDAA KQVTEDDKVL VKPEVEQGNE  540
TPVEKSNVAP NAPVAVSDQS AVVSTRAEGG NDNRDKNCEN GSLQVDAAGV VSIEHSKEVD  600
GTS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F02154.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010061556.10.0PREDICTED: uncharacterized protein LOC104449190 isoform X2
TrEMBLA0A059BRG10.0A0A059BRG1_EUCGR; Uncharacterized protein
STRINGXP_010061555.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM48232751
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.13e-68MYB_related family protein