PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.B00647.1.p | ||||||||
Common Name | EUGRSUZ_B00647 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | MYB_related | ||||||||
Protein Properties | Length: 518aa MW: 57649.6 Da PI: 5.3304 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.7 | 2.6e-13 | 466 | 513 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 +rW+ eE+e l ++v+++G+g+Wk+I ++ + Rt+ ++k++w++ Eucgr.B00647.1.p 466 KRWSLEEEETLRNGVQRFGKGNWKLILHCYRhifEERTEVDLKDKWRN 513 69*********************************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.612 | 460 | 517 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 4.7E-12 | 462 | 515 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 6.73E-15 | 462 | 516 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 2.2E-9 | 464 | 517 | IPR001005 | SANT/Myb domain |
CDD | cd11660 | 3.78E-19 | 466 | 516 | No hit | No description |
Pfam | PF00249 | 2.1E-10 | 466 | 514 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 518 aa Download sequence Send to blast |
MEEIDPDISR WILEFLLRQP RLDDGAVKLA LAVLPLPDSD LRLKKSVLLR SIQSEVDAAS 60 VSEETLDALE AIEEVDRTTA ACGGGGIGGG GPPPAVSDAM REAYRAVAVE CAARFLHGRV 120 DEGGEYSRAV ERIWRGRVRR MEESAVKSGL LSPELLRWGR RVEAAMRDEG EREGVLAMNT 180 RGDAFRSVRA YLGEAWERMG PSFLEVAASR MAEDNPCREL VVVVANGRAE SRACERDDLP 240 DVRASAGPNS ERPAVRIEDD GEMPETSKPD EGLIKRKQLA RRRRSKVGVK IIDDNRETER 300 DVASRCGFDT VPSPDVNRVQ EALKSSSVEL RAAVADPLPD AIRLADSLVR NAAGSPMNFE 360 CAEAQIREDV NASDAYADQN VGPVPGGEEN HVNQSTSHQN KQCKPSLFER NSSARTYEWD 420 DTIDDSPEEP SGSDRVVLPS PRRSTVSPLR KPLTRSLKVS GRRKAKRWSL EEEETLRNGV 480 QRFGKGNWKL ILHCYRHIFE ERTEVDLKDK WRNMNRY* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 274 | 283 | KRKQLARRRR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.B00647.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010031230.2 | 0.0 | PREDICTED: uncharacterized protein LOC104421078 isoform X1 | ||||
TrEMBL | A0A059CZJ3 | 0.0 | A0A059CZJ3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010029695.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM14784 | 6 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58340.2 | 2e-12 | MYB_related family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.B00647.1.p |