PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS776745.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | MYB_related | ||||||||
Protein Properties | Length: 236aa MW: 26527.6 Da PI: 8.7855 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.5 | 3.1e-13 | 67 | 111 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + ++G+g+W+ I+r + +t+ q+ s+ qky EcS776745.10 67 PWTQEEHRRFLMGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKY 111 8*****************************99************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 19.139 | 60 | 116 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 7.18E-16 | 62 | 115 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.0E-17 | 63 | 115 | IPR006447 | Myb domain, plants |
SMART | SM00717 | 1.8E-10 | 64 | 114 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 7.9E-11 | 64 | 111 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 4.11E-9 | 67 | 112 | No hit | No description |
Pfam | PF00249 | 2.3E-10 | 67 | 111 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009739 | Biological Process | response to gibberellin | ||||
GO:0009751 | Biological Process | response to salicylic acid | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
KSVRDVANKY RELEEDVCEI EAGRDPIHGY LCSSFALESF DERDFDACRK KSSAGRGADH 60 ERKKGVPWTQ EEHRRFLMGL LKYGKGDWRN ISRNFVVSKT PTQVASHAQK YFMRQVSGVK 120 DKRRPSIHDI TTVNLTDPAS SSENNRVSSL DQLNALSSQQ KLIGAPELAL DHSLPNYGGF 180 MFFDSSHGHL LMPDAYGFGL NGKRWQEKDN PDGVYPGAGF RSSLIGIHSS RHQIQG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010067497.1 | 1e-178 | PREDICTED: transcription factor DIVARICATA | ||||
TrEMBL | A0A059BHW7 | 1e-176 | A0A059BHW7_EUCGR; Uncharacterized protein | ||||
STRING | XP_010067497.1 | 1e-177 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4340 | 26 | 57 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11280.2 | 1e-64 | MYB family protein |