PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS66017.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | bHLH | ||||||||
Protein Properties | Length: 232aa MW: 26511.3 Da PI: 9.9271 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.2 | 3.3e-14 | 35 | 86 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P+ + ++ + a+i+ A+e++k+L+ EPS66017.1 35 QRMTHIAVERNRRKQMNEHLAVLRSLMPET---YVQRGDQASIVGGAIEFVKELE 86 79***************************9...9******************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 1.1E-13 | 33 | 88 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.19E-12 | 33 | 90 | No hit | No description |
SuperFamily | SSF47459 | 1.31E-16 | 33 | 101 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.072 | 34 | 85 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.4E-11 | 35 | 86 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.7E-10 | 40 | 91 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence Send to blast |
GKRPPDRPES SSAPPRKKRR RRQKVCKNKE EAETQRMTHI AVERNRRKQM NEHLAVLRSL 60 MPETYVQRGD QASIVGGAIE FVKELEHILQ SLEAKKFSLM ENNRDEIAEQ DPTIPYSSGT 120 PFSQFFLYPQ FSQLGHKYTS QSKAAVADIE VTLIETHANI RILSRRRLRQ LSKLVVSFHS 180 LYLSILHLNV TTLHSLALYS ISAKVEEGCR LNSADDLAGA VHHMLRIIED EA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 15 | 21 | RKKRRRR |
2 | 16 | 21 | KKRRRR |
3 | 35 | 46 | RMTHIAVERNRR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016572936.1 | 1e-113 | PREDICTED: transcription factor bHLH71-like | ||||
Swissprot | Q9SK91 | 6e-75 | BH094_ARATH; Transcription factor bHLH94 | ||||
TrEMBL | S8E157 | 1e-171 | S8E157_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | PGSC0003DMT400045210 | 1e-111 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5632 | 24 | 36 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22490.1 | 2e-69 | bHLH family protein |
Publications ? help Back to Top | |||
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