PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS64917.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | C2H2 | ||||||||
Protein Properties | Length: 278aa MW: 31857.8 Da PI: 7.4241 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.9 | 1.8e-05 | 61 | 82 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC++C+ Fs++ n++rH r H EPS64917.1 61 KCQKCSLEFSSPINYRRHVRIH 82 8*******************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50157 | 9.224 | 60 | 87 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.004 | 60 | 82 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 62 | 82 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence Send to blast |
EGEIYSMYTV IQPDMGLESL IQFSGTRDNH VQWIQLLNAL DHQPDLPGWP LITPIKVQML 60 KCQKCSLEFS SPINYRRHVR IHRRSWKVNK EFHNLRGLLA EFWDKCSLEE RKQVISFDDV 120 VLKRTPGSSI INALASMLTE PGIWAFPQVY MKAGSKLMDI IQSSIPITSI VSQDLFSILD 180 DASEGTFLCG GAAEFVQNYI FDGEAANSLE LKNLVASTCF LFELQLVKAW VADKDAEALR 240 CEKLLVEEEE AARKRQAKLV EKRRQKKIRQ KELKVKEQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011076143.1 | 1e-120 | uncharacterized protein LOC105160463 isoform X1 | ||||
Refseq | XP_020548920.1 | 1e-120 | uncharacterized protein LOC105160463 isoform X1 | ||||
Refseq | XP_020548921.1 | 1e-121 | uncharacterized protein LOC105160463 isoform X2 | ||||
TrEMBL | S8DY92 | 0.0 | S8DY92_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | VIT_16s0050g00700.t01 | 1e-114 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3722 | 21 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25610.1 | 1e-77 | C2H2-like zinc finger protein |
Publications ? help Back to Top | |||
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