PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS61017.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | ZF-HD | ||||||||
Protein Properties | Length: 244aa MW: 27221.2 Da PI: 6.791 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 99.1 | 3.3e-31 | 48 | 103 | 2 | 58 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 +k+rY+eClkNhA+ +Ggha+DGCgEf+++ geegt ++lkCaAC CHRnFHRre++ EPS61017.1 48 AKTRYRECLKNHAVGIGGHALDGCGEFIAA-GEEGTLESLKCAACSCHRNFHRREND 103 5789*************************9.999********************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD125774 | 2.0E-21 | 33 | 103 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Pfam | PF04770 | 5.7E-29 | 50 | 102 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 5.7E-29 | 51 | 101 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 27.453 | 52 | 101 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
SuperFamily | SSF46689 | 5.95E-21 | 168 | 241 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 3.6E-31 | 173 | 242 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01565 | 6.0E-27 | 182 | 238 | IPR006455 | Homeodomain, ZF-HD class |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009793 | Biological Process | embryo development ending in seed dormancy | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MEFEDQEGEE IGVEEDCNHD ELPGNSDDVR LTPAKMAAQP ESPPSSHAKT RYRECLKNHA 60 VGIGGHALDG CGEFIAAGEE GTLESLKCAA CSCHRNFHRR ENDGGVPFNF HHHQQQLLLA 120 HHPHAHFGYR GPSGYLHLTP PQNRAPPLLA LPSSSGGGAP AGGSRDEMED YYSNPSSSGG 180 GKKRFRTKFT QEQKDKMLNF SERLGWRIQK QDEELVQQFC HEVGIKRHVL KVWMHNNKHT 240 LGEK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wh7_A | 1e-24 | 183 | 240 | 18 | 75 | ZF-HD homeobox family protein |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020554326.1 | 1e-114 | zinc-finger homeodomain protein 2-like | ||||
Swissprot | A2Z259 | 4e-68 | ZHD1_ORYSI; Zinc-finger homeodomain protein 1 | ||||
TrEMBL | S8DMV2 | 0.0 | S8DMV2_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | GLYMA02G04550.2 | 1e-83 | (Glycine max) | ||||
STRING | Migut.L00170.1.p | 5e-84 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA518 | 24 | 128 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 8e-64 | homeobox protein 22 |
Publications ? help Back to Top | |||
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