PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT28936
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 222aa    MW: 24487.9 Da    PI: 8.4586
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT28936genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.81.9e-2242103259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S.SSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa.edpkvveitYegeHnhe 59 
               dDg++WrKYG K+  +s+fpr YYrCt++   +Cp++k+v++++ +dp ++++tY ++H ++
  EMT28936  42 DDGHQWRKYGEKKLSNSNFPRFYYRCTYKtdlKCPATKQVQQKDmSDPPLFTVTYFNHHSCN 103
               8***************************9999********976438*************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.2E-2330104IPR003657WRKY domain
SuperFamilySSF1182902.09E-2234104IPR003657WRKY domain
PROSITE profilePS5081116.52436105IPR003657WRKY domain
SMARTSM007744.6E-3341104IPR003657WRKY domain
PfamPF031061.7E-2442102IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MALDSVPSYP SDLGSSGRAT RTQQRIRKEE RTWTADTYAP YDDGHQWRKY GEKKLSNSNF  60
PRFYYRCTYK TDLKCPATKQ VQQKDMSDPP LFTVTYFNHH SCNTTSRPIG SAPDTTEQSS  120
SRRAVSICFG SHATGEQPTF LTSPGTLQSP ASTTNQQNDR GAYGHQFQWT DTSPSAGDAP  180
VKMETDSLAG TGASSGAASG HALSRTLLPI GQSRCIEYFQ FL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A8e-1542102968OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF3683650.0EF368365.1 Triticum aestivum WRKY transcription factor (WRKY46) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020172253.11e-166WRKY transcription factor 55-like
TrEMBLA0A446R2R11e-165A0A446R2R1_TRITD; Uncharacterized protein
TrEMBLA0A453HPE71e-165A0A453HPE7_AEGTS; Uncharacterized protein
TrEMBLM8CYI11e-165M8CYI1_AEGTA; WRKY transcription factor 55
TrEMBLW5DRW61e-165W5DRW6_WHEAT; Uncharacterized protein
STRINGEMT289361e-165(Aegilops tauschii)
STRINGTraes_4AL_9E0D1CFA6.11e-165(Triticum aestivum)
STRINGTraes_4DS_FE38A59D0.11e-165(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP203235100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.17e-21WRKY DNA-binding protein 55