PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT27723
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 357aa    MW: 38320.9 Da    PI: 6.9514
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT27723genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.18.8e-05233276654
               HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
       HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 + + R +++ +++  L++l+ +      +K + a++L +A eYIk L
  EMT27723 233 TLMAKVRKEKLGDRITALQQLVSPF-----GKTDTASVLHEANEYIKFL 276
               566788999999***********98.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.741227276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-11230287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.48E-5230281No hitNo description
Gene3DG3DSA:4.10.280.103.4E-8231285IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.0E-4233282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MADEWWSGSQ RSHGTSACSA APLMDTGHAA TCGWTSPAAE STSSITFQDP HRSSSTITHQ  60
PSSDAASSLG DAHMDWTHAF LSGRSDASFQ AVLQDDTLAS MTARPLFRAH QPALDEAVMS  120
NPFRAMSHSF SLLDQVPAAS SPYGTAPLQG MFDSTGASHN VSVLGECQSS TSYGGTAAMH  180
LNQAATQMLG GGAQLQYLSG SGGFMPFGGA PLSSQLLLQA LQPKTSYSSS SNTLMAKVRK  240
EKLGDRITAL QQLVSPFGKT DTASVLHEAN EYIKFLHDQV ASLTYPYLKN VNPLQQFQQK  300
GSENAKDDGG EPKKDLRSRG LCLVPSKCGI QKEGLYYLKM TKDPLRIERY TKELQVI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181117.10.0transcription factor UNE12-like isoform X2
TrEMBLM8C1040.0M8C104_AEGTA; Transcription factor bHLH103
STRINGEMT277230.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29703464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21340.13e-29bHLH family protein