PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT18621
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 313aa    MW: 33706.1 Da    PI: 6.8542
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT18621genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.32.4e-21109173359
               -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT.....EEEEEEES--SS- CS
      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk.....vveitYegeHnhe 59 
               Dgy+WrKYGqK+++ +++pr+YYrCt +   gCp+k+ v+r+++d++       +++Y +eH ++
  EMT18621 109 DGYQWRKYGQKQIEAAKHPRNYYRCTNStnqGCPAKRTVQRNDDDGSddgrpRYTVVYISEHSCK 173
               9************************9888889***********9986333345789999999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512576129No hitNo description
Gene3DG3DSA:2.20.25.802.6E-2393174IPR003657WRKY domain
SuperFamilySSF1182906.41E-21101174IPR003657WRKY domain
SMARTSM007744.9E-28107174IPR003657WRKY domain
PROSITE profilePS5081119.141109153IPR003657WRKY domain
PfamPF031062.3E-22109173IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MQLQRREREL VAQLHELLFP STSSGASSCS GLAADLYWEH GSPQVKATAS CGGGKRRGGR  60
KRVREDERHE EGQGQRGGAA TATKATTRCR RKKQGATTTT LVTTVPDFDG YQWRKYGQKQ  120
IEAAKHPRNY YRCTNSTNQG CPAKRTVQRN DDDGSDDGRP RYTVVYISEH SCKATESAAV  180
PVILETTVRT DTAAAPDVAV VPGSSSGAIS SETQSPASSS DITWSSGGSD GGANVPPRER  240
DDYSRLFAIE DDCWGWNASP PAPAAAAALL QEMDFDGPIR SPVHVAAADG SWISDLFVNE  300
PPFVLNSCHL FGL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-151091731069OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6696621e-150EU669662.1 Triticum aestivum WRKY32 gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020196414.10.0WRKY transcription factor 22-like
TrEMBLN1R1930.0N1R193_AEGTA; WRKY transcription factor 55
STRINGEMT186210.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP57603058
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66550.22e-14WRKY DNA-binding protein 67