PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT05921
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 698aa    MW: 79907.7 Da    PI: 7.1641
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT05921genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.71.8e-12991731898
               --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
               +p kf+++++g    s  ++le ++g+ ++++    +  +++vl++GW  Fv+  +Lk+g f+vF+++++s f  +v +f+
  EMT05921  99 IPQKFVDNFNGH--ISEVIKLEAPDGNIYNIQA--IRDLNKIVLGSGWGVFVSFYKLKAGYFLVFRYIRDSHF--KVLIFD 173
               9*****888666..6779***************..999999****************************9999..887775 PP
2B352.11.2e-162343141399
               TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
        B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
               ++ +++p kf++++ g    s  ++le ++g+ +++k+  +k  +++vl+ GW  F+++ +Lke D +vF+++g+s f  +v +f+ 
  EMT05921 234 RQEMSIPQKFVNNFRGR--ISEVMKLEAPDGNIYNFKV--TKDLNKIVLRYGWAAFASDYQLKEHDLLVFRYIGDSHF--KVLIFDP 314
               4569*******888766..6779***************..**********************************9999..9999885 PP
3B3352.6e-114355191095
               HHHTT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS
        B3  10 vlksgrlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvk 95 
               ++ sg lv+ k++a+++   +e+   +tl +++  + W  +l    ++g+++l+ GW+ Fv  n+L+e D+++F+++++  e ++vv+
  EMT05921 435 TSMSGSLVICKDYAAKYLPHEEQ--FITLCHPHKsNIWVDNL-KVITDGSCMLSVGWSCFVLHNELRESDICLFEVSKNdGEVTMVVH 519
               344567***********533333..68888877637776666.56777789************************9987566656554 PP
4B356.84e-18595689699
               ..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
        B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
               ++++++++++l++p++fa++h  +  +s ++ l    + ++W v++ y  +s +    +  + W +Fv++ngL+eg ++vF+l++   e++++v+vfrk
  EMT05921 595 LQENHGRNNLLTFPREFAAKHLAE--RSHDILLLRpNRREKWCVRYYY--HSMMriqGFSYRSWTKFVSDNGLQEGHVCVFELMKGvCEATMMVHVFRK 689
               4788999**************433..34455555527779******44..333323445568**********************888**********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100173.61E-1580173No hitNo description
SMARTSM010190.002382175IPR003340B3 DNA binding domain
PROSITE profilePS5086310.03882175IPR003340B3 DNA binding domain
PfamPF023624.4E-1098172IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.3E-1598173IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019365.3E-1798177IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019369.02E-22218317IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.5E-21219317IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.589222315IPR003340B3 DNA binding domain
CDDcd100172.24E-17223313No hitNo description
SMARTSM010199.9E-8225315IPR003340B3 DNA binding domain
PfamPF023622.9E-14235313IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.4E-15423518IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019368.83E-18425520IPR015300DNA-binding pseudobarrel domain
CDDcd100179.08E-8426520No hitNo description
PROSITE profilePS5086310.433426522IPR003340B3 DNA binding domain
SMARTSM010190.0017429522IPR003340B3 DNA binding domain
PfamPF023625.1E-9433519IPR003340B3 DNA binding domain
SuperFamilySSF1019361.65E-17584688IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.6E-17584688IPR015300DNA-binding pseudobarrel domain
CDDcd100172.07E-16589688No hitNo description
PROSITE profilePS5086312.407590690IPR003340B3 DNA binding domain
SMARTSM010193.4E-8591690IPR003340B3 DNA binding domain
PfamPF023621.4E-16596689IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 698 aa     Download sequence    Send to blast
MAVQDPQASA CMVCYSSAYI YVLALCLGIV GIVAGCLLLC RSISSSQRLL FCSGLGVSAS  60
WAYRLLLCIS IGFLKELLGK VLDTFDLSDI EYMHPCEAIP QKFVDNFNGH ISEVIKLEAP  120
DGNIYNIQAI RDLNKIVLGS GWGVFVSFYK LKAGYFLVFR YIRDSHFKVL IFDFGTCCEK  180
EVFHVLMNCG PDSQEKESNS ESHRRCELCD VHFYWHHLDD RQKHFLRLMV GDFRQEMSIP  240
QKFVNNFRGR ISEVMKLEAP DGNIYNFKVT KDLNKIVLRY GWAAFASDYQ LKEHDLLVFR  300
YIGDSHFKVL IFDPSGCEKQ LFNIVLNHAP NVPKTCISHD RSFLRETRRR DCGSHDNNSR  360
KTKKMTPVDS PSPRSEGVTS PEVTMNSAGL REITEPHYVL ATGCNLTTAQ KAEVDALVKK  420
VRPVIPFYIT AMNKTSMSGS LVICKDYAAK YLPHEEQFIT LCHPHKSNIW VDNLKVITDG  480
SCMLSVGWSC FVLHNELRES DICLFEVSKN DGEVTMVVHS LEGGHHLQGK GPESQNKCSY  540
PVKVEVTEEE ESDKEHAESS YYYSRYAYDL TGEEQEEIFR SALIQQGNPV YVAVLQENHG  600
RNNLLTFPRE FAAKHLAERS HDILLLRPNR REKWCVRYYY HSMMRIQGFS YRSWTKFVSD  660
NGLQEGHVCV FELMKGVCEA TMMVHVFRKF NGRFVLLD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020176105.10.0B3 domain-containing protein LOC_Os12g40080-like isoform X2
TrEMBLM8AN230.0M8AN23_AEGTA; B3 domain-containing protein
STRINGEMT059210.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP56234179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-21B3 family protein