PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_012705 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | bZIP | ||||||||
Protein Properties | Length: 153aa MW: 17468.9 Da PI: 7.9622 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.8 | 1.2e-13 | 35 | 86 | 6 | 57 |
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 + +r+q+NReAArrsR +K++ + eL +++ +L+++ k +++++ +++ DCAR_012705 35 KRKRMQSNREAARRSRMKKQQHVHELITEIGQLQNQCKVIMSKINQVTNMFL 86 679********************************************99975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.7E-12 | 27 | 83 | No hit | No description |
SMART | SM00338 | 1.6E-13 | 30 | 94 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.703 | 32 | 83 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.5E-10 | 35 | 84 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.5E-11 | 35 | 86 | No hit | No description |
CDD | cd14702 | 1.61E-14 | 35 | 85 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 37 | 52 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence Send to blast |
MMTPQRQNGS GSDKFDACNR MRLLISDDDD FDENKRKRMQ SNREAARRSR MKKQQHVHEL 60 ITEIGQLQNQ CKVIMSKINQ VTNMFLGVVS ENNASRAQLS DMTKRFHLLK SVVQFVEEAE 120 DLGIDVSDVL MESPKFPCPK QQVPTSANMF DC* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017240195.1 | 1e-109 | PREDICTED: bZIP transcription factor 53-like | ||||
TrEMBL | A0A166CIS2 | 1e-109 | A0A166CIS2_DAUCS; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2810 | 23 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G62420.1 | 3e-30 | basic region/leucine zipper motif 53 |
Link Out ? help Back to Top | |
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Phytozome | DCAR_012705 |