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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa17g064710.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
MYB |
Protein Properties |
Length: 261aa MW: 30118.7 Da PI: 10.0455 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa17g064710.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 56.1 | 8.3e-18 | 81 | 128 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd+ll+d+++ +G g+W++ ++ g+ R++k+c++rw +yl
Csa17g064710.1 81 KGAWTKEEDQLLIDYIRNHGEGSWRSLPKSAGLLRCGKSCRLRWINYL 128
79******************************99************97 PP
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2 | Myb_DNA-binding | 52.4 | 1.2e-16 | 134 | 178 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg++T Ed+++v+++ ++G++ W++Ia +++ gRt++++k++w+++
Csa17g064710.1 134 RGNFTDSEDQIIVKLHSLFGNK-WSLIAGKLQ-GRTDNEIKNYWNTH 178
89********************.*********.************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 261 aa
Download sequence Send
to blast |
LSSLLLQNKE TKSKERKKKK VTYQIFSTHK AKHQLGQSHF LLYNTSLQIL LSLLSHYYTH 60 IVKIIIIMGR SPCCEKAHSN KGAWTKEEDQ LLIDYIRNHG EGSWRSLPKS AGLLRCGKSC 120 RLRWINYLRP DLKRGNFTDS EDQIIVKLHS LFGNKWSLIA GKLQGRTDNE IKNYWNTHIK 180 RKLLSRGIDP NTHRSMIQPT DEDLLLRVDR DYRFDSVDSE LNLDLTLGSS PNRWAARDVC 240 VCNLGSREPC INCQTAKWVL *
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator. {ECO:0000250|UniProtKB:Q38850}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF207991 | 1e-134 | AF207991.1 Arabidopsis thaliana putative transcription factor (MYB8) mRNA, complete cds. |
GenBank | AY519561 | 1e-134 | AY519561.1 Arabidopsis thaliana MYB transcription factor (At1g35515) mRNA, complete cds. |