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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cotton_A_14960_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
MYB |
Protein Properties |
Length: 256aa MW: 29628.9 Da PI: 7.2491 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_14960_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 49.7 | 8.7e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g WT+eEd +l +v+++G +W+ +++ g+ R++k+c++rw++yl
Cotton_A_14960_BGI-A2_v1.0 14 KGTWTPEEDRKLTAYVTRYGCWNWRQLPKYAGLARCGKSCRLRWLNYL 61
799*****************99************************97 PP
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2 | Myb_DNA-binding | 56.2 | 8.2e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+ ++eE+e +v++++ lG++ W++Ia+ ++ gRt++++k++w+++l
Cotton_A_14960_BGI-A2_v1.0 67 RGNYSKEEEETIVRLHESLGNR-WSAIAAQLP-GRTDNEIKNHWHTHL 112
899*******************.*********.************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MVRTPCSDKS GLRKGTWTPE EDRKLTAYVT RYGCWNWRQL PKYAGLARCG KSCRLRWLNY 60 LRPNIKRGNY SKEEEETIVR LHESLGNRWS AIAAQLPGRT DNEIKNHWHT HLKKRFMDKQ 120 NNSEKAVEKK EKKLNNHHHL VIDVPTSPPL ILESSLSASP QPTSSDQNST ITKDNTVISS 180 KDSVTYDHNN NNKTSFDGYE ANSGNFWNEP FFWDSCNINT SVTLDPASYE LPDFPFLDEE 240 ISCHFDSYDP LDGFYF
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