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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cotton_A_09723_BGI-A2_v1.0 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
MYB |
Protein Properties |
Length: 328aa MW: 36811.2 Da PI: 5.5658 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_09723_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 61.2 | 2.2e-19 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEde+l+ +++ +G g+Wkt +++ g++R++k+c++rw +yl
Cotton_A_09723_BGI-A2_v1.0 16 KGPWTPEEDEKLLGYINTHGHGNWKTLPKHAGLNRCGKSCRLRWANYL 63
79********************************************97 PP
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2 | Myb_DNA-binding | 50.7 | 4.1e-16 | 69 | 123 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT.........-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.........tWktIartmgkgRtlkqcksrwqky 47
rgr+++eE+ l+++++ lG++ W++Ia +++ gRt++++k++w+++
Cotton_A_09723_BGI-A2_v1.0 69 RGRFSEEEERLIINLHSTLGNKfngfdlilyGWSKIATYLP-GRTDNEIKNFWNTH 123
89***************************************.************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MGRSPCCSSD DANLKKGPWT PEEDEKLLGY INTHGHGNWK TLPKHAGLNR CGKSCRLRWA 60 NYLRPDIKRG RFSEEEERLI INLHSTLGNK FNGFDLILYG WSKIATYLPG RTDNEIKNFW 120 NTHIRKKLLN MGLDPNNHKP RTDLNHLLNL TQLICAAQLG SLMNPWDSSA LKVQADAAQL 180 LQNLIQTLNT NQLSTTTAGL MGSQNSYPYE GLIHGTSSLY ADEPAPVPQK FHSISQGVID 240 NSWASFEGYE IPDMSDFLIS ELVSESPETL SMNQMGDDKT NTNHSSTMSP ADTSMFQAWE 300 KLMGDETDSS FWEDILDLTS SPSSPIKW
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