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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_01697_BGI-A2_v1.0 |
Common Name | F383_27965 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
MYB |
Protein Properties |
Length: 275aa MW: 31209.8 Da PI: 5.4215 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_01697_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 57.3 | 3.7e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l+++++++G g+W++ ++ g+ R++k+c++rw +yl
Cotton_A_01697_BGI-A2_v1.0 14 KGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61
79******************************99************97 PP
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2 | Myb_DNA-binding | 51.8 | 1.9e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l
Cotton_A_01697_BGI-A2_v1.0 67 RGNFTREEEDTIINLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112
89********************.*********.************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MGRAPCCEKM GLKKGPWTPE EDQILINYIN LYGHGNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF TREEEDTIIN LHEMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLKPNH 120 GSIDNKGQPK SNVDSSKDIK KEQQEPMNFL SPAVTAADNR PASPPESSSE VSTVTTSENN 180 SNMCMNKIET QEYVSEIDEN FWSEVLSADN SSMASDFQVA GSDQQLHPQY LPSSPLPKLE 240 TTNDYGSNLY DTDTNMDFWY NLFARVGDLS ELPEI
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that regulates freezing tolerance by affecting expression of CBF genes. {ECO:0000269|PubMed:24415840}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by salicylic acid (SA), jasmonic acid (JA), salt (NaCl), ethylene and auxin (IAA) (PubMed:16463103). Down-regulated by cold treatment (PubMed:24415840). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:24415840}. |