PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla018535
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bZIP
Protein Properties Length: 151aa    MW: 17603.8 Da    PI: 7.574
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla018535genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.28.6e-09113141533
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                ++ rr+++NRe+ArrsR RKk++ieeL+ 
  Cla018535 113 RKLRRMISNRESARRSRMRKKKQIEELQY 141
                5789***********************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502178.554111143IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.5E-7112143No hitNo description
PfamPF001702.7E-7113141IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.06E-7113145No hitNo description
CDDcd147024.71E-11114143No hitNo description
PROSITE patternPS000360116131IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MEMNEDLGFG ENPFNGSLKR HCSSHLIMET NRMMRREGDD HEDESNGCCG FHREILFPTM  60
ITTTGQAPTT TNNNNCNVFS PNSASCYSND NILDVVEVLD IHRHHHLTVM AERKLRRMIS  120
NRESARRSRM RKKKQIEELQ YQARFSNIYL P
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6819321e-114LN681932.1 Cucumis melo genomic scaffold, anchoredscaffold00001.
GenBankLN7132661e-114LN713266.1 Cucumis melo genomic chromosome, chr_12.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008454802.16e-61PREDICTED: light-inducible protein CPRF3-like
TrEMBLA0A1S3C0641e-59A0A1S3C064_CUCME; light-inducible protein CPRF3-like
STRINGXP_008454802.12e-60(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3125622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.12e-11basic leucine-zipper 70