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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Ciclev10031305m |
Common Name | CICLE_v10031305mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
GRAS |
Protein Properties |
Length: 504aa MW: 56466 Da PI: 7.4533 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10031305m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 372.1 | 7.2e-114 | 131 | 501 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs.elykalppsetseknsseelaalklfsevsPilkf 93
lv++L++cAeav+ +d++ a+alL +l+ +a g+++qR+a++f+++L+ rla ++ + + + p ++s +s++ +l+lf+e++P ++f
Ciclev10031305m 131 LVQQLIACAEAVACRDKAHASALLLELRVNALVFGTSFQRVASCFVQGLSDRLALVQPlGAVGVVGPAAKSMAITSQRDESLSLFYEICPQIQF 224
689***************************************************94431334444444444444899999999*********** PP
GRAS 94 shltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
+h++aN Ilea+ege+ vH++D++++ +G QW +L+q+L +R+++ p +l+iTgvg+ +e+l e+g+ L+++A+ l+++fef + v
Ciclev10031305m 225 GHFVANASILEAFEGESLVHVVDLGMTlglpHGRQWHSLMQSLVNRSGKVPkRLKITGVGN----CSERLGEIGDELKRYADGLKLSFEFLA-V 313
***********************99873333678*************77666*********....9**************************.7 PP
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
+k+le+l+ ++++v+ gE+l+ n++l+lh +++es + +vL+ + +lsPkvv +veq+++hn++ Fl rf+eal+yysa+fdsl+a lp
Ciclev10031305m 314 EKSLETLQAKDINVEDGEVLVMNSILELHCVVKESRGALN---SVLQRLHQLSPKVVMLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLP 404
********************************88877777...8************************************************** PP
GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvs 369
+ + +r+k+E++++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF++vp++ + +qak lrkv+ +gy++ ee+g+lvlgWk++p+++
Ciclev10031305m 405 KYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQSVPIK--MLMQAKQWLRKVQtCEGYTIIEEKGCLVLGWKSKPIIA 496
****************************************************96..789*********************************** PP
GRAS 370 vSaWr 374
+S+W+
Ciclev10031305m 497 ASCWK 501
****8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 504 aa
Download sequence Send
to blast |
MEWGMYWRHG LCLDDKNNEV MGLDLNYSAT ACYRCFNLST LANHSCTWST SDETRNHKRI 60 KKTSMIDESS GSSSRLCNSL NSLPRLQFRD HVWVYTQRYL AIEAMEEAAL AMMAGKDTEV 120 KEEGNGDGMK LVQQLIACAE AVACRDKAHA SALLLELRVN ALVFGTSFQR VASCFVQGLS 180 DRLALVQPLG AVGVVGPAAK SMAITSQRDE SLSLFYEICP QIQFGHFVAN ASILEAFEGE 240 SLVHVVDLGM TLGLPHGRQW HSLMQSLVNR SGKVPKRLKI TGVGNCSERL GEIGDELKRY 300 ADGLKLSFEF LAVEKSLETL QAKDINVEDG EVLVMNSILE LHCVVKESRG ALNSVLQRLH 360 QLSPKVVMLV EQDSSHNGPF FLGRFMEALH YYSAIFDSLD AMLPKYDTKR AKIEQFYFAE 420 EIKNIVSCEG PARVERHERV DQWRRRMSRA GFQSVPIKML MQAKQWLRKV QTCEGYTIIE 480 EKGCLVLGWK SKPIIAASCW KCS*
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