PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CCG030553.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | EIL | ||||||||
Protein Properties | Length: 595aa MW: 66806 Da PI: 6.128 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 435 | 7e-133 | 39 | 409 | 2 | 350 |
XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 l++rmwkd ++lkr+ke++k ++++ a++++k +++++qarrkkm+raQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++raWWkekv CCG030553.1 39 ALERRMWKDHVKLKRIKEKQKL--AAQQ-AAEKQKPKQTTDQARRKKMARAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKV 133 589***********99999885..3455.599****************************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.----- CS EIN3 100 efdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykk 197 +fd+ngpaai+ky+a++l+ ++++++ ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPtG+e+ww +lgls q+ ppykk CCG030553.1 134 KFDKNGPAAIAKYEAECLAIGEAENS--RNGNSQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWVKLGLSLGQS-PPYKK 228 *********************99988..7899999********************************************************9.9**** PP GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.........XXXXXXXXXXXXXXXXXXXXX CS EIN3 198 phdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.........slrkqspkvtlsceqkedveg 286 phdlkk+wkv+vLtavikhm p+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s ++ r +++k +s+++++dv+g CCG030553.1 229 PHDLKKMWKVGVLTAVIKHMTPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIQQPSIDNGtsgvtespqGGRGRKKKPAISSDSDYDVDG 326 *****************************************************************944446776665555699999***********8 PP XXXXX.XXXXXXXXXX...................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXX CS EIN3 287 kkeskikhvqavktta...................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsis 350 ++ + ++++++++ + ++ +kr+++++ ++k s + ++ ++ g e+ ++++d n+++ CCG030553.1 327 VDDGVGSVSSKDNRRNqpmdvellssrnditipvqDKELGEKRRRRKRPREKSSHADQQSQPPVDECLGVEQTNTLPDINHTD 409 877777888888888899************88888666666666555555555555555677777777778888888877765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 3.3E-126 | 39 | 285 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.0E-70 | 160 | 292 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 8.11E-62 | 166 | 288 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 595 aa Download sequence Send to blast |
MGELEEIGAD ICSDIEVDDI RCGNIAEKDV SDEEIEAEAL ERRMWKDHVK LKRIKEKQKL 60 AAQQAAEKQK PKQTTDQARR KKMARAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG 120 ASDNIRAWWK EKVKFDKNGP AAIAKYEAEC LAIGEAENSR NGNSQSVLQD LQDATLGSLL 180 SSLMQHCDPP QRKYPLEKGV PPPWWPTGNE DWWVKLGLSL GQSPPYKKPH DLKKMWKVGV 240 LTAVIKHMTP DIAKIRRHVR QSKCLQDKMT AKESAIWLGV LSREESLIQQ PSIDNGTSGV 300 TESPQGGRGR KKKPAISSDS DYDVDGVDDG VGSVSSKDNR RNQPMDVELL SSRNDITIPV 360 QDKELGEKRR RRKRPREKSS HADQQSQPPV DECLGVEQTN TLPDINHTDL QPVEYQMHNT 420 HHENFTSSAL MPMEKGLVGE SSPPQSEFNS YAGVPSTNVN STEKIFVDRG AAIYPLGQNS 480 ELHHETTYSN IYNPSHDYGT NHDGKHSQMA MNMRPEDDRF LKPALHGNGN DLTRGEPHHL 540 AKDTLPTEQD TAVDRHFEFD LPDFAINSPF LEMSSFSLDN LFVDPEDDLI QCFGA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 1e-76 | 165 | 296 | 9 | 140 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 366 | 374 | EKRRRRKRP |
2 | 367 | 372 | KRRRRK |
3 | 367 | 373 | KRRRRKR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC214277 | 0.0 | AC214277.1 Populus trichocarpa clone ACSB1145-L17, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011025257.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_011025258.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 0.0 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A2K2BAD4 | 0.0 | A0A2K2BAD4_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0003s22090.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-177 | ETHYLENE-INSENSITIVE3-like 3 |
Publications ? help Back to Top | |||
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