PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CCG028870.1

Organism

Populus euphratica

Taxonomic ID

75702

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

bZIP

Protein Properties

Length: 210aa MW: 23930 Da PI: 9.5668

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG028870.1	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42.6	1.3e-13	111	169	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 k+ rr+++NRe+ArrsR R+k++ie L+ +v +L++ N++L +++ +l + + +e+ CCG028870.1 111 KKLRRMISNRESARRSRMRRKKQIEDLQYRVNQLQNMNHQLSEKVIHLLESNHQTLQEN 169 899*****************************************999988888777776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.0E-13	107	171	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.7E-12	109	164	No hit	No description
PROSITE profile	PS50217	10.955	109	172	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.6E-12	111	169	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.31E-11	111	162	No hit	No description
CDD	cd14702	9.24E-16	112	163	No hit	No description
PROSITE pattern	PS00036	0	114	129	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence Send to blast
MEPHEIKKFH GLPQANLAHN LFTFPNPIQK QYPSATSLKM QPIVESTNHT PSQANISENP 60 ESSSSLFDKF LITNSLIHVP LHIPSPNTSS VSTDSTLAEP RDQQLGISNE KKLRRMISNR 120 ESARRSRMRR KKQIEDLQYR VNQLQNMNHQ LSEKVIHLLE SNHQTLQENS QLKEKVSSLQ 180 VVLSDLLTPL RNVDDGDCNS IHLKGETSNR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011010367.1	1e-152	PREDICTED: basic leucine zipper 10-like
TrEMBL	A0A2K1XI23	1e-144	A0A2K1XI23_POPTR; Uncharacterized protein
STRING	POPTR_0015s03580.1	1e-111	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF13044	24	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60830.1	4e-22	basic leucine-zipper 70