PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG027382.2
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 759aa    MW: 82451.4 Da    PI: 6.7675
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG027382.2genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.21.4e-11264325263
                  XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  +e++r  r+++NRe+A+ sRqRKk ++eeLe+kv  + +   +L  +++    e a+l++++
  CCG027382.2 264 EEDRRKARLMRNRESAQLSRQRKKHYVEELEDKVRMMHSTIAQLNGKVSYFMAENATLRQQL 325
                  6899*********************************9999999999999999999888875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.4E-16263327IPR004827Basic-leucine zipper domain
PfamPF001701.6E-10264325IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.231265328IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.69E-12267325No hitNo description
Gene3DG3DSA:1.20.5.1709.6E-17267326No hitNo description
CDDcd147041.26E-22268319No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 759 aa     Download sequence    Send to blast
MADPILDHHP HPPQNPNSST ENMAEEFNSQ LPTPPLDPLF FDQNPDNFDV LDLSSNFDDI  60
SDFDITFDDL PDLYLPYENE QFLIPNNNTV NPDPGQPNDN LDLQPGPFEG CLGDFASNTV  120
NLESTDSGGP GTCGDHGGLE VDNYLNPSPS EAESCDSGGS DYRSSVLSPV SSHGSGNSGS  180
GVLNAGSPES GTNVNPCNFV DKKFVKTETE SVKKRKSAKI AVAKRKKEMG DEENGEITRN  240
LKSRKAESEN VSVNVSGSAS LSGEEDRRKA RLMRNRESAQ LSRQRKKHYV EELEDKVRMM  300
HSTIAQLNGK VSYFMAENAT LRQQLSGNGA CPPPMYAPMA PYPWVPCAPY VVKPQGSQVP  360
LVPIPRLKPQ QAVPVAKPKK VESKKGEGKT KKVASVSLFG FLFFILLFRY LVPIVDVKFG  420
GVREGGMGGL GFVSEKFYDQ HKGRVLIVDG HTNGSHEKVG VGYSNYRRHC ERGHNGCLEH  480
DSANKGASER LPGSDECGQF GNASEHLVAS LYVPRNDKLV KIDGNLIIHS VLASERAMAS  540
HEGPEVNITK ETALAIPGVG NNGGRHSHVY RTHTERQKAL DSGSADTSKD NLKSSAAKGK  600
LQQWFREGLA GPLLSHGTCT EVFQFDVSPA PGAIVPVSSV ANMTAERQQN NSTHLKKGNN  660
RRILRGLPIP LPGSDLNITG EHVGRNTQKE NFRGNKSVSP MVVSVLVDPR ESSDREVDGV  720
ITPKSLSRIF VVVLLDSIKY VTYSCVLPSA GPLLHLVTT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1212226KKRKSAKIAVAKRKK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011040731.10.0PREDICTED: uncharacterized protein LOC105136917
TrEMBLA0A2K1X9Z90.0A0A2K1X9Z9_POPTR; Uncharacterized protein
STRINGPOPTR_0006s03300.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74873448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.11e-157bZIP family protein