PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG011302.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 425aa    MW: 47389.1 Da    PI: 8.9996
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG011302.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.35.1e-11138177544
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                  k  rr+++NReAAr+sR+RKka++++Le    +L++  ++
  CCG011302.1 138 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQE 177
                  7789************************876666665554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-8131180No hitNo description
SMARTSM003384.1E-6134189IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.289136180IPR004827Basic-leucine zipper domain
CDDcd147082.05E-21138188No hitNo description
SuperFamilySSF579592.75E-7138180No hitNo description
PfamPF001703.2E-8138178IPR004827Basic-leucine zipper domain
PROSITE patternPS000360141156IPR004827Basic-leucine zipper domain
PfamPF141441.8E-31225298IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MVLSFKGGKR RSKDAGAYDL GELDQALFLY LDGQDPSTVN QDQRQSGAGM RPPTLNIFPS  60
QPMHVEPSKA NTTSATGLVS SATGGSKKSS EPSMELASTR NVSAPGRDPA KAIKREGKRK  120
GPTTSSSEQE GPKTPDPKTL RRLAQNREAA RKSRLRKKAY VQQLESSRIK LTQLEQELQR  180
ARAQGILLCG GGEQGLPVGI ANINADAAFF DMEYARWLEE HHRLMCELRA AVQEHIPENE  240
LRLFVDNCLA HYDEMMNLKI MVAKTDVFHL VSGMWKTPAE RCCMWMGGFR PSELIKIIVG  300
QIEPLTEQQI LGICGLQQST QENEDALSQG LEALYQSLSD TIASESLSYP PNMANYMGQM  360
AVAMNKLSTL EGFVRQADNL RHQTIHRLHQ LLTTRQAARC LLAIAEYFHR LRALSSLWLA  420
RPRRE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011020273.10.0PREDICTED: transcription factor TGA2-like
RefseqXP_011020274.10.0PREDICTED: transcription factor TGA2-like
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A3N7GCP70.0A0A3N7GCP7_POPTR; Uncharacterized protein
STRINGPOPTR_0006s05770.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.30.0bZIP family protein