PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG001091.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 193aa    MW: 22123.5 Da    PI: 5.2758
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG001091.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.58.2e-1579128554
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                  +++rr+ +NRe+ArrsR RK++ ++eL   v  + +eN++L ++l++ ++
  CCG001091.1  79 RKQRRMVSNRESARRSRMRKQKHLDELWSQVVWFRNENHQLLDKLNHVSE 128
                  689*****************************************999765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.880.105.7E-54293IPR008917Transcription factor, Skn-1-like, DNA-binding domain
SMARTSM003382.9E-1275139IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.97977128IPR004827Basic-leucine zipper domain
PfamPF001701.8E-1279128IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.75E-1379128No hitNo description
CDDcd147022.90E-1880131No hitNo description
PROSITE patternPS0003608297IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.8E-1294152No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MQPSEVTGLH YLVPSSPSPY SANFSMSQNN SQMFQFTNPS YNSQIPAQVQ EFSLQASCMS  60
SISTSDEADE QQLSLINERK QRRMVSNRES ARRSRMRKQK HLDELWSQVV WFRNENHQLL  120
DKLNHVSECH DRVVHENAQL KEETSDLRQM LTDMKLNSPY PSLKDLEDIT CDTAYLGSES  180
SNQSITSSSD LLG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19198RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011021132.11e-141PREDICTED: basic leucine zipper 43-like
SwissprotQ9FMC21e-43BZP43_ARATH; Basic leucine zipper 43
TrEMBLB9NC161e-107B9NC16_POPTR; BZIP family protein
STRINGPOPTR_0017s14490.11e-128(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.11e-54basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]