PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG000606.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bZIP
Protein Properties Length: 307aa    MW: 34592.1 Da    PI: 6.9194
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG000606.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.34.4e-102260644
                 HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44
                   rr+++NReAAr+sR+RKka++++Le     L++  ++
  CCG000606.1 22 TLRRLAQNREAARKSRLRKKAYVQQLESSRLRLTQLEHE 60
                 569************************876666655554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.3E-81364No hitNo description
SMARTSM003381.4E-61588IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.7141963IPR004827Basic-leucine zipper domain
CDDcd147082.01E-212173No hitNo description
PfamPF001703.8E-72161IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.33E-72364No hitNo description
PROSITE patternPS0003602439IPR004827Basic-leucine zipper domain
PfamPF141446.8E-32106179IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MADNSQQTDT STDVDADDKN QTLRRLAQNR EAARKSRLRK KAYVQQLESS RLRLTQLEHE  60
LQRARQQGFF IASGFSGDHG HSIAGNEAFA FDLDYSRWLD EHHRLINDLR SAMNSHMSDD  120
ELRLLVDGVM AHYDEIFRLK SIGAKADVFH MLSGMWKTPA ERCFMWLGGF KSSELLKILG  180
NHLEPLTDQQ LMGICNLQQS SQQAEDALSQ GMEALQQSLV DTLSSTSLGP AGSGNVADYM  240
GQMAIAMGKL ATLENFLHQA DLLRQQTLQQ MHRILTTRQA ARALLVISDY TSRLRALSSL  300
WLARPKD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011021829.10.0PREDICTED: transcription factor HBP-1b(c38)
SwissprotQ415581e-163HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLB9HJ060.0B9HJ06_POPTR; Uncharacterized protein
STRINGPOPTR_0008s11710.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60223149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-150bZIP family protein