PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA03g35410
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 371aa    MW: 41244.8 Da    PI: 9.8257
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA03g35410genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.88.9e-1658145186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++  + +Liea  e+  +l+rg+lk+++W+ev++ +      r+  ++ +qCk++++ ++k+yk +k     +  +  s++p+f++l+
  CA03g35410  58 CWSEAATAVLIEAWGERYMELSRGNLKQKHWKEVADIVnsreDYRKTAKTDIQCKNRIDTVKKKYKLEKSKIAAG--QGPSKWPFFEKLD 145
                 7*************************************854444555566679*****************99997..56668******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138377.3E-2656147No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0010431Biological Processseed maturation
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MDLYAGDGFP VKDNGDGSIS SSSEHVNFGS TDTAIETWWR CRXGGGGGGG GGGGREDCWS  60
EAATAVLIEA WGERYMELSR GNLKQKHWKE VADIVNSRED YRKTAKTDIQ CKNRIDTVKK  120
KYKLEKSKIA AGQGPSKWPF FEKLDQLIGP TAKINSTFAA AGVAGPSNLY AGNEQVPMGI  180
PMGVRSLPQL RPHQQLQQKQ KQKQSGRKRP HMDSETSESE SEPELSPAST DSFPPGTFQT  240
KRSRLQTESM NRFAKRQEIH TGIGEGSGKG ENKNWGNSVR ELTRAILKFG EAYEQTESAK  300
VQQMVEMEKQ RMKFAKEMEL QRMQFFMNTQ LELSQLKHKR PGNSNHHSNH HINNHGAATS  360
NHKNNSDSSI *
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00356DAPTransfer from AT3G14180Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016562493.10.0PREDICTED: trihelix transcription factor ASIL2
SwissprotQ9LJG82e-95ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A2G2ZVS70.0A0A2G2ZVS7_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000884011e-159(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA103321823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.15e-69sequence-specific DNA binding transcription factors