PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA03g28100 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 237aa MW: 26385.2 Da PI: 4.3843 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 30.8 | 8.4e-10 | 3 | 78 | 55 | 127 |
NAM 55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfy.kg.rapkgektdWvmheyr 127 +k+ yf ++ ++ +++++++ r+ +g W+ + + +++++ +g++vg ++ ++ kg ++++++ t+W+m ey CA03g28100 3 DKSGYFITPLKNPNKSDQKHARTCGNGAWRGQTSAVPIKNRkGGSVVGYRRNYIYTsKGsKTSSSVTTNWLMREYF 78 56679****9999999**********************99867888*********954446777889********6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 20.713 | 1 | 102 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.97E-16 | 2 | 101 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-4 | 7 | 77 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence Send to blast |
MGDKSGYFIT PLKNPNKSDQ KHARTCGNGA WRGQTSAVPI KNRKGGSVVG YRRNYIYTSK 60 GSKTSSSVTT NWLMREYFVG DDFFKANNIP KQDYALCRIK KHLRGKKDDD DDDAVNMEED 120 DALETIQGML LEPDSTCCTT QEVTEETDQW ESIINEVCDE KIDGVENTTA LVHGEYDLRR 180 CGEIRDVQED GVDGIGSNGI WEAINGILND VTVDIPDNLW LDVDHQPPLL LISSST* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016566736.1 | 1e-176 | PREDICTED: NAC domain-containing protein 78-like | ||||
TrEMBL | A0A1U8G5V7 | 1e-175 | A0A1U8G5V7_CAPAN; NAC domain-containing protein 78-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA814 | 13 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 2e-07 | NAC domain containing protein 2 |