PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA03g27130 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 246aa MW: 27986.6 Da PI: 4.9356 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56.5 | 9.2e-18 | 6 | 127 | 4 | 127 |
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100 ++FhP + el+ + Lk+ ++g++l++ ik v+iy Pw++ +e+k+ yf ++ +k++++++++ r+ +g+W+ + + +++++ +g++v CA03g27130 6 SIQFHPVEAELI-NLLKRFLKGEHLRC--PIKFVEIYGDqTPWQFY---GSEDKSGYFITPLKKRKKSDQKHARTCGNGTWRGQTSAVPIKNRkGGSVV 98 579*********.99*********998..79****997548****5...5678899**********************************99867888* PP NAM 101 glkktLvfy.kgrapkge.ktdWvmheyr 127 g ++ ++ kg++ +g+ t+W+m ey CA03g27130 99 GYRRNYIYTsKGNKTSGSaTTNWLMREYF 127 ********9666666665389*******6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 22.963 | 3 | 151 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.35E-20 | 6 | 150 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.4E-10 | 6 | 126 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence Send to blast |
MSSAVSIQFH PVEAELINLL KRFLKGEHLR CPIKFVEIYG DQTPWQFYGS EDKSGYFITP 60 LKKRKKSDQK HARTCGNGTW RGQTSAVPIK NRKGGSVVGY RRNYIYTSKG NKTSGSATTN 120 WLMREYFVGD DFFKVNNIPK QDYALCRIKK HVRVKMDDDD DAVNMEEQDA LETIRGMLLQ 180 PDSTCCTTQE VTEETDQWES IINEVCDEKI DGVENAVMNW ADDLFIDITD LGDIICCPSE 240 SILEI* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 61 | 65 | KKRKK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016563505.1 | 0.0 | PREDICTED: NAC domain-containing protein 78-like | ||||
TrEMBL | A0A2G2Y6R4 | 0.0 | A0A2G2Y6R4_CAPAN; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA814 | 13 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 3e-14 | NAC domain containing protein 2 |