PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA02g17470
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 452aa    MW: 49797 Da    PI: 5.6311
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA02g17470genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.81.2e-053473841254
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  CA02g17470 347 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 384
                 677888999*******998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.992335384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-11345398IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.04E-5345388No hitNo description
Gene3DG3DSA:4.10.280.109.8E-9349391IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042631Biological Processcellular response to water deprivation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071472Biological Processcellular response to salt stress
GO:2000214Biological Processregulation of proline metabolic process
GO:2000377Biological Processregulation of reactive oxygen species metabolic process
GO:0005634Cellular Componentnucleus
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MADEYQAGVC GGNWWNSSRS IFGSSLCASS VPLGNSNFAW PNDHLLDMKS SCRSNDESGN  60
SDESVVLQEL PKHDSTLQIL GIGLNSSSTS DNWNHTLIHG NDKSESSYPS ILLQDLNSSM  120
NYQQESGVDC SSNSFKQDFT LGMNHPITSS TNTDDQSTTM ISSTFPMDSS FSNYTSSLLQ  180
TLFENDPPNP PQQQQPQLQQ SMFATNNNQP VSFPTSSLNY RPDLNDFSPS LPKFPNSLMR  240
PSLALPKQTP SDFPNYSINA TAPLYNTSSA TSLNNMRGNL LPSMHQQLLQ SPTFNEKSSV  300
PNRTSKSNVE ELRESSSRVA KKSGNNEPTL KRARIETPSP LPSFKVRKEK LGDRITALQQ  360
LVSPFGKTDT ASVLHEAIEY IKFLHDQVNV LSTPYLKNGS TSQQQQIVDK VKEQDLRSRG  420
LCLVPISSTF PVATETTSDF WTPNFGGTTF R*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016560033.10.0PREDICTED: transcription factor bHLH112
TrEMBLA0A2G3A8Q10.0A0A2G3A8Q1_CAPAN; Transcription factor
STRINGSolyc02g079760.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8602486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.15e-58bHLH family protein