PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_47800 | ||||||||
Common Name | KK1_049694 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | WRKY | ||||||||
Protein Properties | Length: 153aa MW: 17708.6 Da PI: 4.6386 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 40.8 | 4.4e-13 | 6 | 49 | 19 | 59 |
SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 19 efprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ++ r+YYrCt++ gCp+ k+v+r +edp + +tY g+Hn++ C.cajan_47800 6 NVCRNYYRCTHKydeGCPAIKQVQRIQEDPPLYRTTYYGHHNCK 49 578********99999**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00774 | 2.8E-11 | 1 | 50 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.4E-13 | 6 | 49 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 3.9E-13 | 6 | 49 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.57E-12 | 7 | 49 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.518 | 9 | 51 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence Send to blast |
MIQIVNVCRN YYRCTHKYDE GCPAIKQVQR IQEDPPLYRT TYYGHHNCKS SLSPQIMLES 60 ASSSDSSMFL SFSNTFPSKE EYPFSTLLSS TKQEPVEVLP DDHIVHNQLP SSDYHLLCDY 120 EFDFNYSRHV TMLSFTESVQ FDEVYGSGLE FDG |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_47800 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020209514.1 | 1e-111 | probable WRKY transcription factor 70 | ||||
TrEMBL | A0A151UIR6 | 1e-110 | A0A151UIR6_CAJCA; Putative WRKY transcription factor 38 | ||||
STRING | GLYMA13G34240.2 | 4e-66 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12638 | 11 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22570.1 | 2e-13 | WRKY DNA-binding protein 38 |