PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_37764
Common NameKK1_039908
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C3H
Protein Properties Length: 766aa    MW: 84843.8 Da    PI: 8.254
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_37764genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.81.5e-06212233426
                    ---SGGGGTS--TTTTT-SS-SS CS
        zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                    e C +fa+ G C+ G++CkF H 
  C.cajan_37764 212 EACINFAK-GRCRMGASCKFVHH 233
                    78******.*************5 PP
2zf-CCCH20.11.2e-06276297426
                    ---SGGGGTS--TTTTT-SS-SS CS
        zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                     lC+ffa  G C+ G  C+F+H+
  C.cajan_37764 276 TLCKFFAN-GNCRNGKYCRFSHD 297
                    59**8888.*************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5010313.338148176IPR000571Zinc finger, CCCH-type
SMARTSM003560.054150174IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.104.2E-4152174IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010312.85208235IPR000571Zinc finger, CCCH-type
SMARTSM003560.015209234IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.106.1E-4212233IPR000571Zinc finger, CCCH-type
SMARTSM003563.3E-5272298IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010315.244272299IPR000571Zinc finger, CCCH-type
SuperFamilySSF902292.35E-6274297IPR000571Zinc finger, CCCH-type
PfamPF006422.5E-4276297IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.102.0E-4277302IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 766 aa     Download sequence    Send to blast
MSGSGKKRSS KWDLTDEPEF EPDNSKQSRS GWSSADVAGS NSSKWSYLEG TDKLKPGVGF  60
SSKEPFSGGR GSNKDDVMNK DYRILDTTME WDEDGSYNKK MSPAFEEWKY KRQSQSPKNG  120
WNRSRSRSPP HGFRWDSGVN DRNRTRAGGS TLPCRDFVAG KCRRGSHCHF PHHDNQNHED  180
SWENKFGEDG APRYSASREG RDYSLKSGRS NEACINFAKG RCRMGASCKF VHHNNSDGHG  240
KVSADEFTKE REFDRRHRDS YFEQGGGHVP NRSGDTLCKF FANGNCRNGK YCRFSHDRQA  300
CRSPNRRSRD DRWGSDGDKD DADKVWDSPK RNGTVAVSDT AKLVEDKSEN VGVAVPGFTP  360
LPMRDGWGHS LDKSRVHGEQ AFSSDKKEAD IWIAGNTAAN MHGSRSIGTD IWLSDTKMSP  420
DWDYRVGSSS CIEDKHEQKK HGITQGSMHL STSEHDRMQI VPGQGFSQNA DSLNPLHSSS  480
CQAVGQSPVV VPILPSKGGF VDGVPNQEVT TEKKYTAEPN IMDAGLSQVS SRNPPPTEKV  540
VGKEQLAQLT NLSASLAHIL GTGPQLPQLY AALNSQDAKD TSSLANTEVP AMPVSNTFIR  600
TDPSVGLPKH YDPMCDSTEP KKGLVKSDPL IQMQSAQNTG VNKDNNKEVL PEEGKKFQDD  660
PISTKENGPL ENMDQTGGPD EAKKTKDMKG TRAFKFALVE FFKEFLKPTW RDGQITKEDY  720
KTIVKKSVDK VTGAMQGAIP QTPEKIDNYL SIATPKLHKL VQVSGV
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_37764
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020203619.10.0zinc finger CCCH domain-containing protein 38 isoform X2
TrEMBLA0A151R8H30.0A0A151R8H3_CAJCA; Zinc finger CCCH domain-containing protein 55
STRINGXP_007137708.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40993252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33835.12e-13C3H family protein