PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_37366
Common NameKK1_038520
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ARR-B
Protein Properties Length: 419aa    MW: 47071.3 Da    PI: 7.8788
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_37366genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like84.79.6e-27183236155
        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    kpr+ Wtp+LH++F++av+q+ G +kA+Pk+ile+m+++gLt++hv+SHLQkY+ 
  C.cajan_37366 183 KPRVIWTPTLHREFLKAVKQI-GDDKAVPKKILEVMNIPGLTRDHVASHLQKYKR 236
                    79*******************.9******************************85 PP
2Response_reg647.2e-22131211109
                    EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS
   Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 
                    vl +d +p+v+e  +q++++ +y +v ++++++ al+l++e +  +D+il+ + mp+mdG+e+l++ ++   ++p+iv++a ++e+ +++a++ Ga
  C.cajan_37366  13 VLAIDHDPSVLEFTKQICSQLKY-HVVTCTESPFALNLVREIKtcIDVILMELHMPNMDGHEFLQHAKKDI-RIPVIVMSADNAEDSVTKAVRNGA 106
                    7899*******************.999************99999**********************98866.9*********************** PP

                    SEEEESS--HHHHHH CS
   Response_reg  95 kdflsKpfdpeelvk 109
                     d+  Kp + ++ ++
  C.cajan_37366 107 CDYWNKPLHVNQFRN 121
                    *******99998776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23002.8E-2810134No hitNo description
SuperFamilySSF521721.41E-2810142IPR011006CheY-like superfamily
SMARTSM004482.5E-1911123IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011033.34912127IPR001789Signal transduction response regulator, receiver domain
PfamPF000725.9E-1813121IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.66E-2014127No hitNo description
PROSITE profilePS5129410.112180239IPR017930Myb domain
Gene3DG3DSA:1.10.10.609.0E-27181239IPR009057Homeodomain-like
SuperFamilySSF466894.66E-18181240IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-23183237IPR006447Myb domain, plants
PfamPF002493.7E-7188235IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
MSEVSQFPAG LRVLAIDHDP SVLEFTKQIC SQLKYHVVTC TESPFALNLV REIKTCIDVI  60
LMELHMPNMD GHEFLQHAKK DIRIPVIVMS ADNAEDSVTK AVRNGACDYW NKPLHVNQFR  120
NMWIHAARKA FSENKNFVTL ENNNSEFGSS TVIEATEIFR DQNNSSSRES DESEHSCQPP  180
AKKPRVIWTP TLHREFLKAV KQIGDDKAVP KKILEVMNIP GLTRDHVASH LQKYKRHMKS  240
TSNGATQQQN EMKNTSNGAT QQQNEMKSTS NGTTQQQNEV KSTSNEMALP NTESGALVGK  300
LRGLVSSSRS RVRFLEDEVT SSRGRVRSLE DEVTSLKSKL ATTAEKRLCD EVVIGGKEEE  360
VATLKAELAR QEAERKELEK KLEETEKAII VEHKCGFLKA ARQARLLAPG FDFSTMHVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A8e-17182242464ARR10-B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_37366
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020202485.10.0two-component response regulator ARR14
TrEMBLA0A151RC900.0A0A151RC90_CAJCA; Two-component response regulator ARR2
STRINGGLYMA08G05165.14e-93(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14524517
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01760.14e-54response regulator 14