PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_32981 | ||||||||
Common Name | KK1_031949 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | ERF | ||||||||
Protein Properties | Length: 185aa MW: 20051.1 Da PI: 4.1671 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43.2 | 9.7e-14 | 2 | 44 | 10 | 55 |
AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++g+Wv+ Ir p ++++r++lg++ t+e Aa+a++aa ++l+g C.cajan_32981 2 RSWGSWVSKIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 44 57**********9...336************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 3.2E-24 | 1 | 54 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.1E-24 | 1 | 58 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.07E-14 | 1 | 54 | No hit | No description |
PROSITE profile | PS51032 | 17.965 | 1 | 52 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.9E-7 | 2 | 44 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.5E-15 | 2 | 53 | IPR016177 | DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MRSWGSWVSK IRAPNQKTRI WLGSYSTPEA AARAYDAALL CLKGSSANLN FPSSSSQYIM 60 SPKSIQRVAA VAANSFINNA TVPPSPTPPS TSSSSSLVSS PSVASSPSDQ IDDEASLISS 120 FEAYTSSDQA NESMAVMEPW YTFADDLQSP KYVDQMLSGA FFDADSSHLL DDLYEESDIR 180 LWSFC |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response (PubMed:27137403). Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:27137403}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_32981 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by jasmonate (JA) and ethylene. Down-regulated by freezing and heat stresses. {ECO:0000269|PubMed:21069430}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015035 | 1e-134 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020235919.1 | 1e-98 | LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF014-like | ||||
Swissprot | Q9SFE4 | 4e-40 | ERF12_ARATH; Ethylene-responsive transcription factor ERF012 | ||||
TrEMBL | A0A151RV73 | 1e-129 | A0A151RV73_CAJCA; Ethylene-responsive transcription factor ERF012 family | ||||
STRING | GLYMA04G43040.2 | 8e-82 | (Glycine max) | ||||
STRING | GLYMA06G11700.1 | 6e-82 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4798 | 31 | 56 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 5e-24 | ERF family protein |
Publications ? help Back to Top | |||
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