PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_29570
Common NameKK1_033365
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family B3
Protein Properties Length: 377aa    MW: 42313.3 Da    PI: 5.6561
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_29570genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3469.3e-1540129299
                    EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
             B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                    +k ++ps+v+   +l lp kf++ h+ k   ++  +ledesg+ +e k+  +k +    l++GW++F  a++L e D+++F+l++ s+f  +v ++
  C.cajan_29570  40 IKSMLPSHVTGGFWLGLPTKFCQLHMPK--VDTIFSLEDESGQLYETKYLTQKAG----LSGGWRGFSMAHNLLEMDVLIFHLVQPSKF--KVYII 127
                    6899******************988533..45689**************444444....************************998999..88888 PP

                    -S CS
             B3  98 rk 99 
                    r+
  C.cajan_29570 128 RS 129
                    75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019362.16E-2034129IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.104.5E-1735130IPR015300DNA-binding pseudobarrel domain
CDDcd100175.03E-2337128No hitNo description
PROSITE profilePS5086311.12439130IPR003340B3 DNA binding domain
SMARTSM010191.3E-1439130IPR003340B3 DNA binding domain
PfamPF023622.1E-1240129IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
RKRDGIVIDG PCNTTQAHST TYQRAKEVQA TLSPLFPSLI KSMLPSHVTG GFWLGLPTKF  60
CQLHMPKVDT IFSLEDESGQ LYETKYLTQK AGLSGGWRGF SMAHNLLEMD VLIFHLVQPS  120
KFKVYIIRSQ GSDEVDGALG LLKLDECRKQ TDEVNGVLDT TEGNDHKNSE MVFGANVSQL  180
DEVENTSEDL VSGIKFSESV VSFKQVNGVE NFRIVVNGLV IDSELSQYDR GKYYELCLSQ  240
GSFLHEQLFE GLNSKLAAGI ISETINIADA IKGSNLTTSP DGFAIWDKTL KAFGTMGMNV  300
GFLLNRLDQL MKLALKLMRY KEVILERDRA EEELKALEAK LVQVKQTINR LDQETDIQRM  360
HPDRLKTMFQ QLAHAPW
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_29570
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237114.10.0B3 domain-containing protein Os01g0234100 isoform X3
TrEMBLA0A151RRB30.0A0A151RRB3_CAJCA; B3 domain-containing protein Os01g0234100 family (Fragment)
STRINGGLYMA01G45623.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF10073398
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.19e-39B3 family protein