PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_29116 | ||||||||
Common Name | KK1_030704 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | WRKY | ||||||||
Protein Properties | Length: 189aa MW: 20704.7 Da PI: 4.4803 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.4 | 2.2e-31 | 10 | 68 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver+++dp+++++tY+ eHnh+ C.cajan_29116 10 SDIWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERNRSDPTMFIVTYTAEHNHP 68 79*************************998****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 34.67 | 4 | 70 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 5.1E-31 | 7 | 70 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.7E-26 | 8 | 70 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.4E-36 | 9 | 69 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.6E-26 | 11 | 68 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence Send to blast |
CQVPVENLSS DIWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CLARKQVERN RSDPTMFIVT 60 YTAEHNHPAP THRNSLAGST RQKPLAPQAA TNGDSDKTPT KPSSPATSGA EEEVPPQGEK 120 SESREEKEDD VDEEEDEFGG LSDMVLTDDF FESLDELSQL TAPSVVTGDC FSDPFSTIAI 180 PSWVAGGCR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 9e-22 | 11 | 71 | 18 | 80 | Disease resistance protein RRS1 |
5w3x_D | 9e-22 | 11 | 71 | 18 | 80 | Disease resistance protein RRS1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in the expression of defense genes in innate immune response of plants. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Activates WRKY 29, SIRK and its own promoters. {ECO:0000269|PubMed:11875555}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_29116 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced after flagellin treatment. {ECO:0000269|PubMed:11875555}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT093295 | 1e-172 | BT093295.1 Soybean clone JCVI-FLGm-17I1 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020234805.1 | 1e-139 | WRKY transcription factor 22, partial | ||||
Swissprot | O04609 | 7e-63 | WRK22_ARATH; WRKY transcription factor 22 | ||||
TrEMBL | A0A151RYG5 | 1e-138 | A0A151RYG5_CAJCA; WRKY transcription factor 22 (Fragment) | ||||
STRING | XP_007139781.1 | 1e-108 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4205 | 32 | 59 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 2e-61 | WRKY family protein |